Stutzerimonas degradans: GOM96_13940
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Entry
GOM96_13940 CDS
T08431
Name
(GenBank) pilus assembly protein PilY
KO
K02674
type IV pilus assembly protein PilY1
Organism
sdeg
Stutzerimonas degradans
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sdeg02044
]
GOM96_13940
02035 Bacterial motility proteins [BR:
sdeg02035
]
GOM96_13940
Secretion system [BR:
sdeg02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
GOM96_13940
Bacterial motility proteins [BR:
sdeg02035
]
Pilus system
Pilus assembly proteins
GOM96_13940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
QGW22039
LinkDB
All DBs
Position
complement(2987744..2991571)
Genome browser
AA seq
1275 aa
AA seq
DB search
MKGIQTARPAIFFASAIIGTTLISAATSAQAAISQSPLSLTVGVSPNIIFTLDESGSMSW
GYVPDSIESNVINSGTITRLYAASEYNSMYYNPNITYIAPPSFDVNGNEIKLTTSFSSAP
INGFRPNDGTLDLSIDYRPTGKEYRMPLGTHQRANNPPNDFSVFQSFNTNETRTATSAAG
IEFEITRSGTSKKYTYDCVIKQAGPVLDATAFSCTRNSNTYTAKTPAYYYTYDDTLQSCD
ARKSNTNCYKLVFVKDNEKENFATWYSFYRTRALATLSATSLAFSQLSPAIRLGWQNLKL
CTNLNGGDTTNCKDNSFRQYDAQHKGQFYSWLKDVYFNSGTPLPGAMKRAGEFLKSDVAW
HKYPNSRVESNKNTAENTYACRPSYHILMTDGMWNETTTNPSSFQHDGDSIDLPDTKSYS
KQRPYVDATSNTLADLAMHYWSTDLHSLKNRVSPFFADKTGSDTENYWNPKNDPATWQHM
TNFIMGLGLTSSMNVSGLPWEGSTFAGEGYEALLSGTQNWPPAASGSSNNVYDLWHAAIN
SRGEFFSVDSPDAMVQAFEDILNRIADRKSSAARPATSSGLVIDDMATSVSYQTSYASDE
NWSGDLKRSSKQLVLKDGKYVLEIKEDWSAQKELPAAASRTIKIADEGGANTSKLKDFSS
DNAGDPTTVGTLAYYLNINPETAGESADSRWEQRIDYLRGDDSQEGTNEDDFRTRTSALG
DLYGSSPVVVSGPRYLESFANRLEGHLDKDGKVTGENSYSAFMATINGTAEGSTKRSGRV
YVGGNDGMLHGFNTETGIEEFAFIPTAVFNKLNKLTGKNYSHQFYVDGSPVVADVYDQDN
KKWRTILVGTLRAGGKALFALDITTPGSEQLLWEFDASDIEDEEAVKPGYSFSTPTIARL
HNGRWAVVTGNGYENGASDGKAALYIIDAVTGKLTKSLEVSGTEGAANGLSSPVLADYNA
DGIADYAYAGDLQGNLWRFDLLPTINTDADGDGVLDQTAPLATSTLGTVTADNFKVAYGG
KPMFRAKAGSSETAPAQSITAAPSLVRHPSRLGYLVIFGTGKFFETDDKEGVKTHAQSVY
GIWDTKTRAEPTSAFTIQRTVGENGHLVKQKIIEELTGTYTQGGTNPARTITTNAVDWVD
ANGNIQRYGWYLDLAVDETQFEGEMLIEKMSTLGQTLFFQTLVPNDDPCADGASNWTYAL
NPFTGGRTSFHAFDLRHIDSNNAVNVVSGIKQDGEGGVTISQTPEGFEACTGLVCQKIYP
DPSSIGRQSWRVVGN
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaattcagaccgcccggccggccatcttcttcgccagcgccatcatcggaacc
acattaatcagcgcggcaaccagcgcccaggccgccatatcccagagtccactcagcctg
acggtcggcgtatcgcccaatatcattttcaccctcgacgaatcgggcagtatgtcttgg
ggctacgttccagactctatcgaaagcaatgtcataaacagcggcacgataacccgcctg
tacgcagcttccgaatacaactcgatgtactacaacccgaacattacttacatcgccccc
ccatcattcgatgtaaacggcaacgagataaagctgaccacttcatttagctcagcccca
atcaacggcttccgccccaacgacggcaccttggacctatccattgattaccgtccaact
ggtaaagagtaccggatgccgctcggaacccaccagcgggctaacaatccgccaaacgac
ttttcagtcttccaatctttcaacactaacgaaacccgaaccgcaaccagtgcagccggt
atcgagttcgagatcacccgttccggcacatcaaaaaaatacacatatgactgtgtcatc
aaacaagccggccccgtgctggatgctaccgctttcagctgcaccagaaacagcaatacc
tacaccgccaaaactccggcctactactacacttacgacgacaccttgcaatcgtgcgac
gctaggaagtcaaacaccaactgctacaaactcgtattcgtcaaggacaacgagaaagag
aacttcgccacttggtattccttctaccgaaccagagcactggccaccttatcagcaacc
agcctggcattttcccagctttccccggcaatccgactaggctggcaaaacctaaaactg
tgcaccaacctcaacggcggagatacaaccaactgcaaggacaacagcttccgccaatac
gacgcacaacataaaggccaattctatagctggctcaaagatgtctatttcaacagcgga
acacctctaccaggtgcaatgaagagagccggcgaatttcttaaaagcgatgtggcttgg
cacaaataccctaactcccgggtcgaatccaataagaatacagccgaaaacacctatgcc
tgcaggccgagttaccacatcctgatgactgacggcatgtggaacgaaacgaccaccaat
cccagttcgttccagcacgatggtgacagtatcgacttgcccgacaccaagagctattcg
aagcaacgaccctacgtggacgctacttccaatacgctggccgacctggcaatgcactat
tggtccacggacctccatagtctcaagaacagggttagtccgttttttgccgataaaact
ggtagcgacactgaaaactactggaatccgaagaacgacccggccacttggcagcacatg
acaaacttcatcatgggattgggcctcaccagctccatgaatgtttcgggcttgccgtgg
gaaggttcgacattcgccggagaaggctatgaagccttgctgagcggaacgcagaactgg
ccgccggcggcgtccggctcgtccaacaacgtatacgacctctggcacgccgcaatcaat
tcgcgcggagagttcttcagcgtcgacagtcccgacgcaatggtgcaagcgttcgaagac
atcctgaaccggattgctgaccgaaagtcctccgcggccaggccggcgaccagctccggg
ttggtgatcgacgacatggccaccagcgtttcctatcaaacttcctacgctagcgacgag
aactggtcgggcgatctcaaacgctcctccaagcagcttgtactcaaagatggtaagtac
gtgctcgaaatcaaagaagactggagcgcacagaaagagttaccagcggcagccagccgc
acgataaagattgcggatgaaggcggcgccaacacgagcaagctcaaggacttcagctcg
gataacgcaggcgaccccacaacggtgggaacgctggcttactacctgaacatcaacccc
gagacagcgggtgagtcggcagacagcaggtgggaacaacgcattgactacttgcggggc
gacgatagtcaagaagggactaacgaagatgacttccgcacgcgcaccagtgcacttggc
gacctgtacggttccagccccgtggtagtatccggcccacgctatctcgagagtttcgcc
aaccgtctggaagggcatcttgataaggacggcaaggtaaccggtgaaaattcctactcg
gcattcatggcaaccatcaacggcacggcggaaggctcgaccaaacgcagcggtcgcgta
tatgtcggcggcaacgacggcatgctacatggcttcaatactgaaaccggcatcgaagag
tttgctttcatccccaccgctgttttcaacaagctcaataaactgaccggcaaaaactac
agccaccagttctatgtcgatggctcaccagtggtcgccgacgtttacgatcaagacaat
aagaagtggcgcaccattctggtgggcaccctacgtgcaggcggtaaagcgctgtttgcc
ttggatatcaccacccccggcagcgaacagttgctgtgggagttcgacgcgagcgacata
gaggatgaagaggcggttaaacccggctacagcttctccacaccgaccattgcccgtctg
cataatggccgttgggccgtggtcaccggtaacggctatgaaaacggtgccagtgatggc
aaggcggcgctttatattatcgacgccgtaaccggaaaacttaccaagagcctggaagta
tcgggaaccgaaggggccgctaacggcctctccagcccggtgctggccgactataacgcc
gacggcatagccgactatgcctatgccggcgatctccaaggcaatctttggcgcttcgac
ctgctacccaccatcaacaccgatgccgacggcgacggcgttcttgatcagaccgccccg
ttggcgacaagtacgctcggaaccgttactgcggataacttcaaggttgcctacggcgga
aaaccgatgttccgggcaaaggcgggtagtagcgaaacagctccggcccagtccatcacc
gcggcccccagtctggttcgtcacccgagccgcttgggctacctcgtgatctttggcacg
ggcaagttcttcgagactgatgacaaggagggggtcaaaacccatgcacagagcgtctac
ggtatctgggacaccaagactcgtgccgagccgaccagtgctttcaccattcagcggacg
gtcggtgaaaacgggcatctggtgaaacagaagatcatcgaagagctgacgggcacctat
acccaaggcggaaccaacccggcacgcaccatcacgaccaatgccgtggactgggtcgac
gcgaacggcaatatccaaaggtatggctggtatctggacctcgcagtcgacgagactcag
ttcgagggcgagatgctgatcgaaaagatgtcgactcttggccagacgcttttcttccag
accctggtccccaacgacgatccgtgtgctgacggcgcgagcaactggacctatgcgctc
aatcccttcaccggaggccggacctcattccatgccttcgaccttcgacatattgatagc
aacaacgcagtgaatgtcgtaagcggcatcaaacaggacggcgaaggtggcgttaccatt
tcgcagactccggaaggcttcgaggcatgcaccggcctggtgtgccagaagatctatcca
gacccatccagcattggccgccaatcgtggcgagtagtaggtaactga
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