Stutzerimonas degradans: GOM96_15155
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Entry
GOM96_15155 CDS
T08431
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
sdeg
Stutzerimonas degradans
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdeg03400
]
GOM96_15155
DNA repair and recombination proteins [BR:
sdeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
GOM96_15155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
ResIII
TrwB_AAD_bind
AAA_16
AAA_10
AAA_30
T2SSE
AAA_7
AAA_19
nSTAND3
CbiA
AAA_28
Zot
SRP54
Zeta_toxin
AAA_6
Motif
Other DBs
NCBI-ProteinID:
QGW22276
LinkDB
All DBs
Position
3230918..3232393
Genome browser
AA seq
491 aa
AA seq
DB search
MEAFADHLVLGADAHGQPSLHPLRLANRHGLIAGATGTGKTVTLQRLAEQFSDAGVAVFA
ADIKGDLSGLGAAGAPTGKIAERIASMPWLGHQPRAYPVTLWDVQGRSGHPLRTTLSEMG
PLLLGNLLELTDSQQAALYAAFKVADREGLLLLDLKDLKALLGHLRDHPEVLGEDRALFT
GASSQALQRRLATLEQQGAEALFGEPALQLEDLLQPDRDGRGRIHLLDASQLVHEAPKVY
ATFLLWLLAELFEQLPERGDQERPLLALFFDEAHLLFNDTPKALQERLVQVVRLIRSKGV
GVYFVTQSPGDLPDDVLAQLGLRVQHGLRAFTVKEQKALRSVADGFRENPEFSALEVLTE
LGIGEALVGGLEAKGTPAMVQRVAIAPPQSRVGVLSEAERAELIARSPLRGRYDQPVDRE
SAYEMLTARARQAAEASPEPAPANAGKRGSEGGAVGDFAGRVLKSALNQAASQIGRQIVR
GLLGSLLGGKR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggaagcattcgccgatcatctggtactgggcgccgatgcccacggccagcccagcctc
cacccgctacgcctggccaaccgccacgggctgatcgccggcgctaccgggaccggcaag
acggtcacgctgcaacgcttggccgagcagttcagcgatgcgggagtcgcggtgttcgcc
gctgatatcaagggcgacctgagcggtctgggcgccgccggtgcgccgacgggcaagatc
gctgaacgcatcgccagcatgccctggctggggcaccagccgcgcgcttatccggtgacg
ctgtgggacgtgcagggacgcagcggccatccgctgcgtaccaccctcagcgagatgggg
ccattgctgctgggcaacctgctggagctgaccgacagtcagcaggcggcgctctacgcc
gcgttcaaggtggccgatcgtgaaggcctgctgctgctcgatctcaaggatctcaaggcc
ctgctggggcacctgcgcgaccatcccgaggtgctcggcgaggatcgtgcgctgttcacc
ggcgcctcgtcgcaggccttgcagcggcgcctggcgacgctcgagcaacagggcgccgag
gcgctgttcggcgagccggcgctgcagctggaagacctgctgcagccggaccgcgacggt
cgcggtcgcatccacctactcgacgccagccagctggtacacgaggcccccaaggtttat
gcgacgttcttgctctggttgctggccgagctgttcgagcagctgcccgagcgcggcgat
caggaacggccgctcctggcgctgttcttcgacgaagcgcatttgctgttcaacgacacg
cccaaggcgctgcaggagcgtctggtgcaggtggtgcggctgatccgctccaagggcgtg
ggcgtctacttcgtcacccagtcgccgggcgacctgccggacgatgtgctggcccagctc
ggcctgcgcgtccagcacggcctgcgggcgttcacggtgaaggagcagaaggcgctgcgc
tcggtggctgacggcttccgcgagaatccggagttctccgcgcttgaagtgctcaccgag
ctgggtatcggcgaggcgctggtcggcggtctggaggccaagggcacgccggcgatggtg
cagcgggtcgcgatagcgccgccgcaatcgcgcgtgggcgtgctgagcgaggccgagcgt
gccgagctgatcgcgcgctcgccgttgcgtggccggtacgaccagccggtcgatcgcgaa
tcggcctacgagatgctgacggcgcgggcgcgccaggccgccgaggcgtcacccgagcct
gcgccggcaaacgctggcaagcgcggcagtgaaggcggtgcggtcggcgacttcgccggg
cgggtactcaagagtgccttgaaccaggcggccagccagatcggccggcagatcgtgcgc
ggcctgcttggctcgctgctgggtggcaagcgctga
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