Stutzerimonas degradans: GOM96_15315
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Entry
GOM96_15315 CDS
T08431
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
sdeg
Stutzerimonas degradans
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdeg03036
]
GOM96_15315 (xerD)
Chromosome and associated proteins [BR:
sdeg03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
GOM96_15315 (xerD)
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Paralog
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Motif
Other DBs
NCBI-ProteinID:
QGW22307
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Position
3263483..3264379
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AA seq
298 aa
AA seq
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MPALHDPIIDRFLDALWLEKGLADNTRDAYCSDLALFNGWLAERGASLVGVGRDAILDHL
AWRLANGYKARSTARFLSGMRGFYRYLLREGLVESDPTLRIELPRLGRSLPKALSEADVE
ALLAAPDIGDALGLRDRAMLEVLYACGLRVSELVGMRQEQISLRQGVLRTFGKGNKERLV
PLGDEAMYWLERYRRDARGLLLGDKLGDVEFLSRRGDPMTRQTFWHRIKLHARQAGIAAA
ISPHTLRHAFATHLLNHGADLRTVQMLLGHSDLSTTQIYTHIARARLQALHAEHHPRG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgccggcactacacgatccaatcattgatcgttttctggatgcgctgtggctggagaaa
ggcctggcagacaatacgcgcgacgcctattgcagtgaccttgccctgttcaatggttgg
ctcgcggagcgtggggcttccctggtcggtgtgggccgcgacgccattctcgatcacttg
gcctggcgcttggccaatggctacaaggcgcgttcgaccgcgcggtttctctccggtatg
cgtggcttctatcgctatctgctgcgtgaaggtttggtggagagcgatccgacgctgagg
atcgagctgccgcgactgggccgatcgctacccaaggccttgtccgaggccgacgtcgaa
gcgctgctggccgcgccggatattggtgatgcgcttggcctgcgcgaccgggcgatgctc
gaggtgctctacgcctgcggtctgcgcgtcagtgagctggtcggtatgcgtcaggagcag
ataagcctgcgccagggtgtattacgcaccttcggcaagggcaacaaggagcgcctggtg
ccgctgggcgatgaagctatgtactggctggagcgctatcgacgcgacgcgcgtggcctg
ttgcttggcgataagctgggcgatgtcgaatttctgagtcggcgaggcgatccgatgaca
cgccagacgttctggcaccgaatcaaactgcatgccaggcaggccgggatcgctgccgcc
atctcgccgcataccctgcggcatgcctttgcaacgcatctgctcaatcatggcgccgat
ctgcgtaccgtgcagatgctgcttggccacagcgatctatcgactacgcaaatctatacg
cacatcgcgcgcgcgcgcctgcaggcgctgcatgccgagcaccatccgcggggctag
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