Stutzerimonas degradans: GOM96_15415
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Entry
GOM96_15415 CDS
T08431
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GOM96_15415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdeg03400
]
GOM96_15415
Enzymes [BR:
sdeg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GOM96_15415
DNA repair and recombination proteins [BR:
sdeg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GOM96_15415
Prokaryotic type
GOM96_15415
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QGW22327
LinkDB
All DBs
Position
3283218..3283913
Genome browser
AA seq
231 aa
AA seq
DB search
MTQDDRIKLEPSWRDALREEFDQPYMHELSAFLRREKAAGKIIYPPGPLIFNALNSTPLE
RVEVVILGQDPYHGPGQAHGLCFSVQPGVAPPPSLQNIFKELKRDLNIDPPGHGYLQHWA
DQGVLMLNTSLTVEQGNAGSHAGAGWQRFTDRVIEVVSERRPHLVFLLWGAHAQSKARLI
DPTRHLILKSAHPSPLSAHRGFLGNGHFSRTNQFLRQHGMQPIDWQLPAQV
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggatgatcgaatcaagctcgaaccgagctggcgggatgcgctgcgtgaggag
ttcgatcagccttatatgcatgagctgtccgctttcctgcgtcgtgagaaagcggctggc
aagatcatctacccacccgggccgctgatcttcaatgcgctgaattcgacgccgctggag
cgggtcgaggtggtcatcctcggacaggatccctaccacgggcccgggcaggcccacggg
ctgtgcttctcggtgcagccgggcgttgcgccgccaccgtcgctgcagaacattttcaag
gagctcaagcgcgatctgaacattgatccgccgggtcacggctatcttcagcattgggcg
gatcagggggtgctgatgctcaatacctcgctgaccgtggagcagggcaatgccggctcg
catgccggcgctggctggcagcgcttcaccgatcgggtcatcgaggtggtgagcgagcgg
cggccgcatctggtttttctgctctggggtgcgcatgcccagagcaaggcgcggctgatc
gacccaacccgccatctgattctcaagtcggcgcacccttcgccgctctcggcgcatcgc
ggttttctgggtaacggccatttcagccgcaccaaccagtttctccggcagcacggcatg
cagccgatcgactggcagctacccgcgcaggtctag
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