Stutzerimonas degradans: GOM96_15485
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Entry
GOM96_15485 CDS
T08431
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GOM96_15485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdeg03019
]
GOM96_15485
03009 Ribosome biogenesis [BR:
sdeg03009
]
GOM96_15485
03036 Chromosome and associated proteins [BR:
sdeg03036
]
GOM96_15485
Enzymes [BR:
sdeg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
GOM96_15485
Messenger RNA biogenesis [BR:
sdeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GOM96_15485
Ribosome biogenesis [BR:
sdeg03009
]
Eukaryotic type
90S particles
RNase
GOM96_15485
Prokaryotic type
rRNA processing factors
GOM96_15485
Chromosome and associated proteins [BR:
sdeg03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
GOM96_15485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
QGW22341
LinkDB
All DBs
Position
3295929..3296618
Genome browser
AA seq
229 aa
AA seq
DB search
MSTSLARLERKLGYQFKDQELMLLALTHRSYAGRNNERLEFLGDAILNFIAGEALFHHFT
QAREGQLSRLRARLVKGETLAVLARGFELGDHLRLGSGELKSGGFRRESILADTLEALIG
AIYLDAGMEAARERVLAWLANELQGLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDIQG
EPHCRTFYVECQVALLVDKTRGQGASRRIAEQVAAAAALIALGVENGND
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacttcgctagcccgcctcgagcgcaagctcggctaccaattcaaggatcaggag
ctgatgctcctggcgctgacccatcgcagctacgccgggcgcaataacgagcgcctggag
tttcttggtgatgcgatcctcaacttcatcgctggcgaagcgctgtttcatcacttcacc
caggcgcgggaaggccagctatcgcgcctgcgggcgcgactggtgaaaggcgagaccctg
gcggtgctggcgcgtggtttcgagctcggcgaccacctcaggctgggctctggcgagctc
aagagcggtggttttcgccgtgaatccattcttgccgatacgctcgaagcactgatcggt
gccatctacctggatgccggcatggaggccgcgcgcgagcgcgttctcgcctggttggcc
aacgagttgcaggggctgaccttggtcgataccaacaaggatccgaaaacgcgactgcag
gagttcctgcaatcgcgcgcctgcgagctgccgcgctacgaggtggtggatatccaggga
gagccgcactgccgaacgttttacgtggaatgccaggtggcgctgctggtggacaagacg
cgcggacagggtgccagtcgccgcatcgctgaacaggttgccgcggcagccgcactgatc
gccctcggcgtggagaacggaaatgactga
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