KEGG   Stutzerimonas degradans: GOM96_15485
Entry
GOM96_15485       CDS       T08431                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
sdeg  Stutzerimonas degradans
Pathway
sdeg03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:sdeg00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    GOM96_15485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdeg03019]
    GOM96_15485
   03009 Ribosome biogenesis [BR:sdeg03009]
    GOM96_15485
   03036 Chromosome and associated proteins [BR:sdeg03036]
    GOM96_15485
Enzymes [BR:sdeg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     GOM96_15485
Messenger RNA biogenesis [BR:sdeg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     GOM96_15485
Ribosome biogenesis [BR:sdeg03009]
 Eukaryotic type
  90S particles
   RNase
    GOM96_15485
 Prokaryotic type
  rRNA processing factors
   GOM96_15485
Chromosome and associated proteins [BR:sdeg03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     GOM96_15485
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_2
Other DBs
NCBI-ProteinID: QGW22341
LinkDB
Position
3295929..3296618
AA seq 229 aa
MSTSLARLERKLGYQFKDQELMLLALTHRSYAGRNNERLEFLGDAILNFIAGEALFHHFT
QAREGQLSRLRARLVKGETLAVLARGFELGDHLRLGSGELKSGGFRRESILADTLEALIG
AIYLDAGMEAARERVLAWLANELQGLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDIQG
EPHCRTFYVECQVALLVDKTRGQGASRRIAEQVAAAAALIALGVENGND
NT seq 690 nt   +upstreamnt  +downstreamnt
gtgagcacttcgctagcccgcctcgagcgcaagctcggctaccaattcaaggatcaggag
ctgatgctcctggcgctgacccatcgcagctacgccgggcgcaataacgagcgcctggag
tttcttggtgatgcgatcctcaacttcatcgctggcgaagcgctgtttcatcacttcacc
caggcgcgggaaggccagctatcgcgcctgcgggcgcgactggtgaaaggcgagaccctg
gcggtgctggcgcgtggtttcgagctcggcgaccacctcaggctgggctctggcgagctc
aagagcggtggttttcgccgtgaatccattcttgccgatacgctcgaagcactgatcggt
gccatctacctggatgccggcatggaggccgcgcgcgagcgcgttctcgcctggttggcc
aacgagttgcaggggctgaccttggtcgataccaacaaggatccgaaaacgcgactgcag
gagttcctgcaatcgcgcgcctgcgagctgccgcgctacgaggtggtggatatccaggga
gagccgcactgccgaacgttttacgtggaatgccaggtggcgctgctggtggacaagacg
cgcggacagggtgccagtcgccgcatcgctgaacaggttgccgcggcagccgcactgatc
gccctcggcgtggagaacggaaatgactga

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