Stutzerimonas degradans: GOM96_15505
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Entry
GOM96_15505 CDS
T08431
Symbol
cmoB
Name
(GenBank) tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
KO
K15257
tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
Organism
sdeg
Stutzerimonas degradans
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdeg03016
]
GOM96_15505 (cmoB)
Transfer RNA biogenesis [BR:
sdeg03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
GOM96_15505 (cmoB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltransf_9
Methyltransf_23
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_12
CMAS
Motif
Other DBs
NCBI-ProteinID:
QGW22345
LinkDB
All DBs
Position
complement(3299076..3300038)
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AA seq
320 aa
AA seq
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MNLDLTPLAWHLAGTPLAAWANGVQQQLNAKLEIGHGDLPRWRRAVDALPALTPATIELR
DGFCLEASCDDATRQATREALMGLSPWRKGPFEVFGVHVDTEWRSDWKWQRVAPHLDLVG
KRILDVGCGNGYYMWRMLGAGADSIVGVDPNWLFFCQFHAMKRYLPELPVWHLPFALEEL
PAKLEGFETVFSMGVLYHRRSPIDHLLDLKDCLIRGGELVLETLVVDGDENTALVPEDRY
AQMRNVWFLPSVSALELWLRRAGFVDVRCVDVSVTRVEEQRSTEWMRYQSLPDFLDPQDH
GRTLEGLPAPMRAVLLARKP
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcgacctgactcccctcgcctggcacctggccggtactccgctggccgcctgg
gccaatggcgtgcagcagcagctgaatgccaagctggaaatcggccacggcgacctgccg
cgctggcgccgcgcagtcgacgccctgcccgcgctgacgcctgcaacaatcgaactgcgt
gatggcttttgtctggaggccagttgcgacgacgccacccgtcaggcaacccgcgaagcc
ctgatggggctctcgccttggcgcaaggggccgttcgaggtgttcggcgtgcatgtggac
accgagtggcgctcggactggaagtggcagcgtgtcgcgccgcacctggatctcgtcggc
aaacgcatcctcgatgtcggctgcggcaacggctactacatgtggcgcatgctcggcgcc
ggtgccgacagcatcgtgggcgtcgatcccaactggctgttcttctgccagttccatgcg
atgaagcgttacctgccggagctgccggtgtggcacctgcccttcgcgctggaggagtta
cccgcgaagctcgaaggctttgagactgtgttctccatgggggtgctctaccaccgccgc
tctcccatcgaccacctgctcgacctgaaagattgtctgatccggggcggcgagctggtg
ctggagactctggtggtcgacggcgacgaaaacaccgcgctggtgcccgaggatcgttac
gcgcagatgcgcaacgtctggtttctgccttcggtgtccgcgctggaactctggctgcgc
cgggccggcttcgtcgacgtgcgttgcgtggatgtcagcgtgacccgcgtcgaagaacag
cgcagcaccgaatggatgcgctaccagtcgcttcccgacttcctcgatccgcaggaccat
ggcagaaccctggagggactgccggcgcccatgcgcgccgtgttgctggcgcgcaagccg
tag
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