Stutzerimonas degradans: GOM96_15755
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Entry
GOM96_15755 CDS
T08431
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
sdeg
Stutzerimonas degradans
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdeg03021
]
GOM96_15755 (rapA)
Transcription machinery [BR:
sdeg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
GOM96_15755 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Ddi2_HDD
Motif
Other DBs
NCBI-ProteinID:
QGW22394
LinkDB
All DBs
Position
complement(3348054..3350903)
Genome browser
AA seq
949 aa
AA seq
DB search
MAQQYLPGQRWISDSEAELGLGTILTHDGRMLTVLYPATGETRQYATRSAPLTRVRFAPG
DEITHFEGWKMTVREVDDVDGLLVYHGFTAQNEARTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYHTLQHQSTQLQSSLWGLGGVRAQPIAHQLHIAKEVADRIAPRVLLADEVG
LGKTIEAGLIIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLEVALFDDERFIESDA
SNPFEDAQLALVSLEWLKDDERAQDAAFAAGWDLLVVDEAHHLVWHPDGASAEYQLVEQL
AEVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLEAFRAESSSYQPVAQAVQELLDD
GRLSQEAHETIHTFLGAEGEALLAAATDGDIEASSRLIRELLDRHGTGRLLFRNTRAAVQ
GFPERQLHPYPLPCPAEYMELPLGEHAELYPEVAFQSQQDDGEAGTRWWQFDPRVEWLID
TLKMLKKYKVLVICAHAETALDLEDALRVRSGIPATVFHEGMSILERDRAAAYFADEEFG
AQVLICSEIGSEGRNFQFAHHLVLFDLPAHPDLLEQRIGRLDRIGQQHVIQLHVPYLETS
PQQRLFQWYHEALNAFLATCPTGNALQHQFGPRLLTQLEEGDDEAFQRLIDEARAERERL
EAELHTGRDRLLELNSGGGEQGKALVEAIEEQDDQFALPIYMEQLFDAFGIDSEDHSENA
LVLRPSEKMLDASFPLGDDEAVTITYDREQALAREDMQFLTWEHPMVQGGMDLVLSGSMG
NTAVALIKNKALKPGTVLLELLFVSEVVAPRALQLSRFLPPLALRCLLDGNGNDLATKVA
FDTLNDQLESVPRNSANKFVQAQRDVLAAQIAAAEAKVAPRHTERVAEAQRKLKAGLDEE
LARLVALQAVNPSVRDSEIEALRQQREEGLAALEKAALRLEAIRVLVAG
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatctaccggggcaacgctggatcagcgacagcgaagccgagctcggg
ctgggaaccatcctgacccacgacgggcgaatgctcaccgtgctctatcccgccaccggc
gaaacccgccagtacgccacgcgcagcgcaccgctgacgcgcgtgcgcttcgccccgggc
gacgagattacccatttcgaaggctggaagatgaccgtgcgtgaggtcgacgacgtcgac
ggcctgctggtctatcacggcttcaccgcacagaacgaagcccgcaccctgccggaaacc
cagctgtcgaatttcatccagttccgcctggccagcgaccgcctgttcgccggccagatc
gatccgctggcctggttcagcctgcgctatcacactctgcagcatcaaagcacccagctg
cagtcgtcgctgtggggcctgggcggcgtgcgtgcgcaacccatcgcgcaccagctgcac
atcgccaaggaagtcgccgaccgcattgccccgcgcgtgctgttggcggatgaggtgggc
ctgggcaagaccatcgaggccggcctgatcatccatcgccagctgctctccggtcgcgcc
agccgcgtgctgatcctggtgccggagaaccttcagcaccagtggctggtggagatgcgc
cggcgcttcaacctggaggtcgcgctgttcgacgacgagcgcttcatcgaaagcgacgcc
agcaacccgttcgaggacgcccagctcgcgctggtctcgctggaatggctgaaggacgac
gaacgcgcccaggatgccgccttcgccgccggctgggacctgctggtggtcgacgaggcg
caccacctggtctggcatccggacggtgccagcgccgagtaccagctggtcgaacagctg
gccgaagtgatccccggggtgctgctgctcaccgcgacccccgaacagctcggtcaggac
agccacttcgcgcgtctgcgcctgctcgaccccaaccgcttccacgacctggaggccttc
cgcgccgaaagcagcagctaccagccggtcgcccaggccgtacaggaactgctcgatgac
ggtcgcctgtcgcaggaagctcacgaaaccattcacaccttcctcggcgccgaaggtgag
gctctgctcgccgccgccaccgatggcgacatcgaggccagcagccggctgatccgtgag
ctgctcgaccgtcacggcaccggccgcctgctgttccgcaatacccgcgccgccgtgcag
ggcttcccggagcgccagctgcacccctacccgctgccctgcccggccgaatatatggaa
ctgccgctgggtgaacatgccgagctgtacccggaggtggccttccagagccagcaggac
gacggcgaggccggcacgcgctggtggcagttcgacccgcgcgtcgaatggctgatcgac
accctgaagatgctgaagaagtacaaggtactggtgatctgcgcccacgccgaaaccgcg
ctggacctggaggacgcgctgcgcgtgcgctcgggcattccagccacggtgttccacgag
ggcatgagcatcctcgagcgcgaccgcgccgcggcctacttcgccgacgaggagttcggc
gcgcaggtgctgatctgctccgagatcggctcggagggccgcaacttccagttcgcccat
catctggtgctgttcgacctgccggcgcacccggacctgctcgaacagcgcatcggccgt
ctcgaccgtatcggccagcagcacgtcatccagttgcacgttccctatctggaaaccagc
ccgcagcagcgcctgttccagtggtatcacgaggcactgaacgccttcctggccacctgc
ccgaccggcaacgccctgcagcaccagttcggcccgcgcctgctgacacagctggaagaa
ggcgacgacgaggcgttccagcgcctgattgacgaggcccgcgccgagcgcgagcgcctc
gaagccgaactgcacaccggtcgcgaccgcctgctggaactcaactccggcggcggcgaa
cagggcaaggcgctggtcgaagccatcgaggaacaggacgaccagttcgccctgccgatc
tacatggagcagctgttcgacgccttcggcatcgacagcgaagaccactccgagaacgcc
ctggtgctgcgccccagcgagaagatgctggatgccagcttcccgctcggcgacgacgag
gcggtcactatcacctacgaccgcgagcaggccctggcccgcgaggacatgcagttcctg
acctgggaacatcccatggtgcagggcggcatggatctggtgctgtccggttcgatgggc
aataccgcggtggcgctgatcaagaacaaggcgctcaaacccggcaccgtcctgctcgaa
ctgctgttcgtcagcgaagtggtggcgccgcgcgcgctgcagctgagccgcttcctgccg
ccgctggcgctgcgctgcctgctcgacggtaacggcaacgatctggcgaccaaggtggcg
ttcgatacgctcaacgatcagctggaaagcgtgccgcgcaacagcgccaacaagttcgtc
caggcccagcgcgacgtgctcgccgcgcagatcgccgccgccgaagccaaggtcgcgccg
cgccacaccgaacgcgtcgccgaggcgcagcgcaagctcaaggccggactggacgaagaa
cttgcccgcctggtcgcgttgcaggcggtcaacccgagcgtgcgcgacagcgagatcgaa
gcgctgcgccagcagcgcgaagaaggcctggccgcgctggagaaagccgcgctgcgcctg
gaggcgatccgggtcctggtggccggctga
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