KEGG   Stutzerimonas degradans: GOM96_15780
Entry
GOM96_15780       CDS       T08431                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
sdeg  Stutzerimonas degradans
Pathway
sdeg00061  Fatty acid biosynthesis
sdeg00071  Fatty acid degradation
sdeg01100  Metabolic pathways
sdeg01212  Fatty acid metabolism
sdeg02024  Quorum sensing
sdeg04146  Peroxisome
Module
sdeg_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:sdeg00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    GOM96_15780
   00071 Fatty acid degradation
    GOM96_15780
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    GOM96_15780
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GOM96_15780
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:sdeg01004]
    GOM96_15780
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sdeg04147]
    GOM96_15780
Enzymes [BR:sdeg01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     GOM96_15780
Lipid biosynthesis proteins [BR:sdeg01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   GOM96_15780
Exosome [BR:sdeg04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   GOM96_15780
  Exosomal proteins of breast cancer cells
   GOM96_15780
SSDB
Motif
Pfam: AMP-binding AMP-binding_C AMP-binding_C_2
Other DBs
NCBI-ProteinID: QGW22399
LinkDB
Position
3355337..3357028
AA seq 563 aa
MTENFWKDKYPVGVASEINPDEYQNIQTVLKLSCERFADKPAFSSLGKTLTYGDLYRLSG
DFAAYLQHHTDLQPGDRIAVQLPNLLQYPIVVFGAMRAGLIVVNTNPLYTAREMEHQFND
AGAKALVCLANMAHLAEAVLPKTGIKHVVITEVGDMLAPLKRLLVNTVVKHVKKMVPAYR
LPSAVRLNDALAQGRGRTVRDASPNGQDVAVLQYTGGTTGVAKGAMLTHRNIVANMLQCK
ALMGSNLEEGREVLIAPLPLYHIYAFTFHCMTMMLSGNHNILISNPRDLPAMMKDLARYR
FSGFVGLNTLFVALCNSEDFRKLDFSALKVTLSGGMALQLATAERWKQVTGCAICEGYGL
TETSPVASVNPITHIQLGTIGIPVPSTRFKVINDDGQELPQGEIGELCIKGPQVMKGYWQ
RPEATAEVMDAEGFFKTGDIGVIQADGYIRIVDRKKDMILVSGFNVYPNELEDVLATLPG
VLQCAAIGVPDEKSGEAIKLFVVVKPGESLTREQVMQHMHDNLTGYKRPRYVEFRDSLPT
TNVGKILRRELRDQELKKLAEAS
NT seq 1692 nt   +upstreamnt  +downstreamnt
atgaccgaaaacttctggaaggataaatatcctgttggggttgccagcgagatcaatccc
gatgagtaccagaatatccagacagtgctgaaactgtcctgcgagcgcttcgcggacaag
ccggctttcagcagtctcggcaagacgctgacctacggcgacctctatcgactctccggc
gatttcgccgcctatcttcaacatcacaccgatctgcaacccggcgatcgcatcgccgtg
cagctgcccaatctgctccagtacccgatcgtggtgttcggcgccatgcgtgccgggctg
atcgtggtcaacaccaacccgctgtacaccgcgcgggagatggaacaccagttcaacgat
gccggcgccaaggcgctggtgtgcctggccaacatggcacacctggccgaggcggtgctg
cccaagaccgggatcaagcatgtggtgatcaccgaggtgggcgacatgctcgcgccgctc
aagcgtctgctggtcaacaccgtggtcaagcacgtcaagaaaatggtaccggcctaccgt
ctgccttcggcggtgcgtctgaacgatgctctggcccagggccgcggccggacggtgcgt
gacgccagtccgaacggccaggatgtcgccgtgctgcagtacaccggcggcaccaccggc
gtcgccaagggcgcgatgctgacgcaccgcaacatcgtcgccaacatgctgcagtgcaag
gcgctgatgggctcgaacctcgaggaaggtcgtgaagtgctgatcgcgccgctgccgctc
tatcacatctatgcgttcacctttcattgcatgacgatgatgctcagcggcaaccacaac
atcctcatcagcaacccgcgcgacctgccggcgatgatgaaggacctggcccgctatcgc
ttcagcggcttcgtcggtctcaacacgctgttcgtcgcgctgtgcaacagcgaggacttc
cgcaagctggacttctccgcgctcaaggtcacgctgtcgggcggcatggcgctgcagctg
gccacggcagaacgctggaagcaggtcactggctgcgcgatctgcgaaggctacggcctg
accgaaaccagcccggtggcctcggtcaacccgatcacgcatatccagctcggcaccatc
ggcatcccggtgccttcgacacgtttcaaggtcatcaacgatgacggccaggagctgccg
cagggcgagatcggcgagctgtgcatcaaggggccgcaggtgatgaagggctactggcaa
aggccggaagccaccgccgaggtgatggatgccgaaggcttcttcaagaccggcgatatc
ggcgtgatccaggctgacggctacatccgcatcgttgaccgcaagaaggacatgattctg
gtctccggcttcaacgtctacccgaacgagctggaagacgtgctggcaacgctgccgggc
gtcctgcagtgtgccgccatcggcgtaccggacgagaaatccggcgaagcgatcaagctg
ttcgtggtggtcaagccgggcgagagcctgactcgcgagcaggtcatgcagcacatgcac
gataacctgaccggctacaagcgcccgcgctacgtcgagttccgcgatagtctgccgacc
accaacgtcggcaagatcctgcgtcgggagttgcgtgatcaggaattgaagaagctcgcc
gaagcgagctga

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