Stutzerimonas degradans: GOM96_16190
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Entry
GOM96_16190 CDS
T08431
Name
(GenBank) TonB-dependent receptor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
sdeg
Stutzerimonas degradans
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdeg02000
]
GOM96_16190
Transporters [BR:
sdeg02000
]
Other transporters
Pores ion channels [TC:
1
]
GOM96_16190
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Ortholog
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
OMP_b-brl
OmpA_membrane
Motif
Other DBs
NCBI-ProteinID:
QGW22476
LinkDB
All DBs
Position
complement(3443856..3445817)
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AA seq
653 aa
AA seq
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MQLVRRISRPRHLSLTLLGSLLPLAALADTPVTLKNEVITATQTAHSELSAPASVSVVTR
EELDKLPVYNLADAVKYLPGVHINPSSTYGRKEIKLRGMDSDYTLLLVNGRRINSRDALS
SNYANDFDLSSIPMAAIERIEVIRGPMSSLYGADALGGVVNVILRQATDETRAGVAYTYE
HPTEGESGDSHQASGYVSGALIDGKLRGNLFVEKTDQAAWLSEQTVNPNTDAVEQRQNGS
VFGSLNWLLDERQTVDLDFTHRKDDREADWNNFGAVVTNVQEMERWSLGLGHTGNWDGFN
TRVRYYYEDVDLMDDSQIMTNLRGMKGDIQQKNHTVDGQLSAALGSHLFTVGSEWRRTEL
AHNQNLGSDTEVDQKALYLQDEFSLGDLDITLGGRWDDHDTFGGEFSPRAYGVYNLTDNW
VIKGGAGKSFKAPSIYQSDETYGVLACRGMCTLIGNPDLKPETATSYEIGTLYQDERLEA
GIMFFHNDIEDMIVTDTWRVGYRPPVMTYSNVSKARVQGYELHGRYALTDSIGLRGNYTY
SDAEDRDTDEAIRNSPQHVANLGVDWQAMPKLGLNLDYQYTGSQLLYVSAAEPNVESGAF
HQLNLGAKYQATRELSLRAGMNNLTNEKRDDVAQSVDNILMGRTLFVGFNYDI
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgtacgaagaatcagccgtccccgtcatctctccctgaccctgctcggcagc
ctgctgccgctggcagcgctggctgataccccggtcaccctgaagaacgaagtcatcacc
gccacccagaccgcccacagcgaactcagcgccccggccagcgtctcggtggtcacccgc
gaggagctggacaagctgccggtctacaacctggccgatgcggtcaagtacctgccgggc
gtgcacatcaacccgtcgtccacctatggccgtaaggaaatcaagctgcgcggcatggat
tcggactacaccctgctgctggtcaacggccggcgcatcaactcgcgcgatgcactgtcg
tccaactacgccaacgactttgacctgtcgtcgatcccgatggccgccatcgagcgcatc
gaagtgatccgcgggccgatgtcctcgctgtacggtgccgatgcgctgggcggcgtggtc
aacgtgatcctgcgtcaggccaccgacgagacgcgcgccggtgtcgcctacacctacgag
catcccaccgaaggggagtccggcgacagccatcaggccagcggctacgtcagcggcgcg
ctgatcgacggcaagctgcgcggcaacctgttcgtcgagaaaaccgaccaggccgcctgg
ctgagcgagcagaccgtcaaccccaataccgatgccgtggagcagcggcagaacggcagc
gtcttcggttcgttgaactggctgctcgacgagcgccagaccgtcgatctcgacttcacc
catcgcaaggacgaccgcgaggccgactggaacaatttcggtgccgtcgtcaccaacgtg
caggagatggagcgctggagcttgggcctcggtcacaccggcaactgggacggcttcaac
acccgcgtgcgctattactacgaagacgtcgatctgatggacgactcgcagatcatgacc
aatctgcgaggcatgaaaggcgatatccagcagaagaaccacaccgtcgacggccagctt
agcgccgcgctcggcagccacctgttcaccgtcggcagcgaatggcggcgtaccgagctc
gcgcataaccagaatctcggctcagacaccgaagtcgaccagaaggcgctctacctgcag
gacgagttttccctcggcgacctggacattacccttggcggccgctgggacgaccacgac
accttcggcggcgaattcagcccccgcgcctacggcgtctacaacctcaccgacaactgg
gtgatcaagggcggcgccggcaagtccttcaaggcgccgagcatctaccagtccgacgaa
acctacggcgtactggcctgccgcggcatgtgcacgctgatcggcaaccccgacctcaag
ccggaaaccgcaaccagctacgagatcggcacgctctatcaggacgagcgcctggaagcc
ggcatcatgttcttccacaacgacatcgaggacatgattgtcaccgacacttggcgcgtc
ggttaccgcccgccggtaatgacctacagcaacgtcagcaaggcgcgcgtgcagggctac
gaactgcacggccgttatgcgctgaccgactccatcggcctgcgcggcaactacacctac
tcggatgccgaggatcgcgacaccgacgaagcgatccgcaactcgccgcagcatgtcgcc
aacctcggcgtcgactggcaggccatgcccaagctcgggctgaacctcgactaccagtac
accggcagccagctgctctacgtctcggcggccgaacccaacgtcgagagcggtgcgttc
catcagctcaacctgggcgccaagtatcaggcgacgcgagagctgtcgctgcgcgcgggg
atgaacaacctgaccaacgaaaaacgcgacgacgtcgctcagtcggtcgacaacatcctc
atgggccgcaccttgttcgtcggtttcaactacgacatctga
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