Stutzerimonas degradans: GOM96_16825
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Entry
GOM96_16825 CDS
T08431
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
sdeg
Stutzerimonas degradans
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdeg01011
]
GOM96_16825
Enzymes [BR:
sdeg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GOM96_16825
Peptidoglycan biosynthesis and degradation proteins [BR:
sdeg01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GOM96_16825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
Motif
Other DBs
NCBI-ProteinID:
QGW22594
LinkDB
All DBs
Position
complement(3577142..3579064)
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AA seq
640 aa
AA seq
DB search
MRSRLSNLLLCLCFSTLAVDVSAASLTQQRQLYDEAKRALAKGDSAPYRRHASALRDYPL
EPYLAYDELTARLKTASTAEIEKFLAEHGDLPQISWMKLRWLRLLAARGDWPTFLKYYDP
KLNFTELDCLFGQYQLGRGLPEGDATAERLWLVGKSQPEACDVLFTQWTAKGGLTEERRW
KRTKLAVEAGNYGLASFLSKNLSSLRGHGELLVEVAQKPQMLSQTARFSGSHPAMADVVA
IGLRRLARQDPEKALALLDGYARRHAFSAEEKVAIARQIGLTLAKRFDSRALQVMAEYDP
ELRDNTVSEWRARLLLRLGRWEDVYALTQRFPDELAKSNRWRYWQARSLELAKPQSPQAI
SLYQPVAAERDFYGFLSADRIQAPYKLNHQPLSLPPKLVQKVRNTAGIRRALEFHARGQI
VDGRREWYHVSRLFSRDELVAQARLAYEMGWYFPAIRSISQAQYWDDLDIRFPMAHRSTL
VNAAKAREIHPSWVFAITRQESAFMADARSHVGASGLMQLMPATAKETARRFGIPLSSPQ
QVLNPNVNIQLGAAYLSQIYAQFNGNRVLASAAYNAGPGRVRQWLRDAGHLSFDVWVENI
PFDETRQYVQNVLTYSVIYGQKLNAPQPLVEWHERYFENQ
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtcgactctccaacctgctgctctgcctgtgtttttcaacgctggccgtggat
gtctcggccgccagcctgactcagcagcgccaactctacgatgaagccaagcgcgccctg
gccaagggcgacagcgcaccgtaccggcgccacgccagcgcactgcgcgactatccgcta
gaaccgtacctggcctacgacgagctgaccgctcggctcaagaccgcgagcaccgcggag
atcgagaagtttctcgccgaacacggcgacctgccgcagatcagctggatgaaactgcgc
tggctgcgtcttctggcagcgcgcggcgactggcccacgttcctcaagtactacgatccg
aagctgaacttcaccgagctggactgcctgttcggccagtatcagctcggccgcggcctg
cctgaaggcgatgccaccgccgagcgcctctggctggtcggcaaatcgcagcccgaagcc
tgcgacgtgctgttcacgcaatggaccgccaagggcgggctcaccgaggagcgccgctgg
aaacgcaccaagctcgcggtggaggccggcaactacgggctggccagcttcctcagcaag
aacctgtcgagcctgcgtggccacggcgagctactcgtcgaggtcgcacagaagccgcag
atgctgagccagaccgcgcgtttttccggcagccatccggccatggccgacgtggtcgcc
attggcctgcgccgcctcgcccgccaggacccggagaaggcgctggccttgctcgacggc
tatgcccggcgccacgccttctccgccgaagaaaaggtggcgatcgcccggcagatcggc
ctgacgctggccaagcgcttcgacagccgcgcgctgcaggtgatggccgagtacgacccg
gagctgcgcgacaacaccgtcagcgaatggcgggcgcgcctgctgctgcgcctgggccgc
tgggaagatgtctatgcgctgacccagcgtttccccgacgagctggccaagagcaaccgc
tggcgctactggcaggcgcgcagcctggaactggccaagccgcagagcccgcaggcgatc
tcgctgtaccagccggtcgccgccgaacgcgacttctacggcttcctctcggccgatcgc
atacaggcgccgtacaagctcaaccaccagccgctgtccttgccacccaagctggtacag
aaggtccgcaacaccgccggcatccgccgcgcgctggaattccacgcacgtgggcagatc
gtcgatggccggcgcgagtggtatcacgtcagccggctgttcagccgtgacgaactggtg
gctcaggcgcgactggcctacgagatgggctggtatttcccggcgatccgcagcatcagc
caggcacagtactgggatgacctcgacatccgcttcccgatggcgcaccgcagcacgctg
gtcaacgcggcgaaggcgcgggaaatccatccgagctgggtgttcgccatcactcgccag
gaaagcgccttcatggccgatgcgcgttcgcacgttggcgccagcgggctgatgcagctg
atgcccgccacggccaaggaaaccgcgcgccgcttcggcattccgctgtcctcgccgcag
caggtgctcaacccgaacgtcaacatccagctcggcgcggcgtatctgagccagatctac
gcgcagttcaacggcaatcgcgtactggcctcggccgcctacaatgccggccccggccgc
gtgcggcagtggctgcgcgatgccgggcacctgtcgttcgatgtctgggtggagaacatc
ccgttcgacgagacccgtcagtacgtgcagaacgtgcttacctattcggtgatctacggg
cagaagctcaacgcgccacagccgctggtggagtggcacgagcgctatttcgagaatcag
taa
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