Stutzerimonas degradans: GOM96_16920
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Entry
GOM96_16920 CDS
T08431
Name
(GenBank) retention module-containing protein
Organism
sdeg
Stutzerimonas degradans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
QGW22612
LinkDB
All DBs
Position
3599334..3606074
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AA seq
2246 aa
AA seq
DB search
MAKLIGTVRQVVGEAFAVGEDGVRRLLIEGDRLYAGERVITSAGGAVDIDLVGAGELMLG
RESDLLLDEQLLVAAEGGTQAAPPITSATELADVEALQRAIAAGEDPTLVAPATAAGPAA
GGAGGAGGGNSFVLLNEVGGAIDPAIGFPTRGLGGIPEFPDLEVAPLEETPEPVDGVPLA
VDDLTQISEDTPSIAGNVLSNDQPGSDGGIRVVSVGTVAGTFGQLVLNADGTYSYALNSS
LPAVQGLDDGETLTETFTYTMQDADGDPSSATLTITITGSNDGPTLSLVATDSLVDEAGL
SSGSAAAGDGEFASGSFTLADTDGLDDLQSVTINGKTVAIGDLQGETFAGDHGTLTVTAY
NAATGVASYTYELTEATTDGAGTETDTFSLSVTDGTGSSTPASLVIEIVDDVPHAVADSA
SVGEDSVTAITGNVLTNDLHANGQPGADTPTSFVNWTSTTAAHGTFTDLGGGNYSYLINP
ADAAVQGLDEGETLTETFTYTMQDADGDPSSATLTITITGSNDGPTLSLVATDSLVDEAG
LSSGSAAAGDGEFASGSFTLADTDGLDDLQSVTINGKTVAIGDLQGETFAGDHGTLTVTA
YNAATGVASYTYELTEATTDGAGTETDTFSLSVTDGSGSSTPASLVIEIVDDVPHAVADS
ASVGEDSVTAITGNVLTNDLHANGQPGADTPTSFVNWTSTTATHGTFTDLGGGNYSYLIN
PADAAVQGLDEGETLTETFTYTMQDADGDPSSATLTITITGSNDGPTLSLVATDSLVDEA
GLSSGSAAAGDGEFASGSFTLADTDGLDDLQSVTINGKTVAIGDLQGETFAGDHGTLTVT
AYNAATGVASYTYELTEATTDGAGTETDTFSLSVTDGTGSSTPASLVIEIVDDVPHAVAD
SASVGEDSVTAITGNVLTNDLHANGQPGADTPTSFVNWTSTTATHGTFTDLGGGNYSYLI
NPADAAVQGLDEGETLTETFTYTMQDADGDPSSATLTITITGSNDGPTLSLVATDSLVDE
AGLSSGSAAAGDGEFASGSFTLADTDGLDDLQSVTINGKTVAIGDLQGETFAGDHGTLTV
TAYNAATGVASYTYELTEATTDGAGTETDTFSLSVTDGTGSSTPASLVIEIVDDVPHAVA
DSASVGEDSVTAITGNVLTNDLHANGQPGADTPTSFVNWTSTTAAHGTFTDLGGGNYSYL
INPADAAVQGLDEGETLTETFTYTMQDADGDPSSATLTITITGSNDGPTLSLVATDSLVD
EAGLSSGSAAAGDGEFASGSFTLADTDGLDDLQSVTINGKTVAIGDLQGETFAGDHGTLT
VTAYNAATGVASYTYELTEATTDGAGTETDTFSLSVTDGTGSSTPASLVIEIVDDVPHAV
ADSASVGEDSVTAITGNVLTNDLHANGQPGADTPTSFVNWTSTTAAHGTFTDLGGGNYSY
LINPADAAVQGLDEGETLTETFTYTMQDADGDPSSATLTITITGSNDGPTLSVVGANVSE
LGLPSGSDATGYSEFATGTFTLGDVDGLDDIQTVTIGGTAVNIANLIGSSFAGAYGVLNI
LGYNDETGVVSYQYQLTSPTTDVDGVTEADTFTISVSDGAASTSSDLVIGIADDLPSLGA
FVAATIPNEVGTVNGTFAVVPGADGLGGFEITGPTLDGVTYQTTQNFSGGTFVSTTLTAL
TDTNQQVFTLTVSADGTYSFQLIAPEAGYTEAIDFTSLEPGKPISVASSIENGWTFDGLL
FSGTSPTTFTNPDSGSGSNSDLLNISGNGFGLGSASSVPDNAGFLYTQQGGADSLRFFAD
ISSSLEGKGTVQISWAAYGSTVGGTPLAVSTQSITLTADGWVTIDPGVSFENLVVRVDVI
GANTGGIRVQDFSYSREVLPDDQSLSFGIVAQDGDGDLSAPSTLDVQITAADSSDAFTLI
GTAGDDVIAASSLTDSISGNTGFDIVDYGDATTAIAASLLSGTGTLGDALGDSYTGIEGL
AGGAGDDVLTGNTLDNYLAGGAGSDTLVGGEGDDVLDGGIGADILQGGIGDDVLIGGAGT
DALEGGSGMDIADYSADGVGITVDLESGAPGIGGLAAGDTYLDMEGVIGGSGDDLLAGDT
QDNYLDGGLGDDVLSGGGGDDVLIGGLGDDSMTGGAGRDTFVWRAGDNGSDTISDFHIDP
AGVTSDVLDLSELLSGVDADSATLDNYLTFAFGNDTVISVSVTPGGAPVQDITLAGVDLA
DLYGTTNEAAVIDSLLADNALKVDNT
NT seq
6741 nt
NT seq
+upstream
nt +downstream
nt
atggccaagttgatcggtaccgtcaggcaggttgtgggtgaggctttcgcggtcggtgag
gacggcgtacgccggttgcttatcgagggcgatcgtctgtatgccggcgagcgggtgata
accagcgcaggcggggcggtggatatcgacctggtcggagcgggcgaactcatgctgggg
cgcgaatccgacctgctgctcgacgagcaattgctggtcgctgccgagggcggtacccag
gcggcaccaccgatcacatcggcgaccgagctggccgacgtcgaggctctgcagcgcgcc
atcgcggccggtgaagacccgaccctggtcgctccagccacggccgcgggtccggcagct
ggtggcgcgggtggcgccggtggtggtaattccttcgtgctgttgaatgaagtcggtggg
gctatcgatcccgctatcggtttcccgactcgaggcctgggcggtatcccggagtttccc
gatctggaagtggcaccgctcgaggaaacgcctgagccggtggatggcgttcccctggct
gtcgatgacctgacgcagatcagcgaggacacaccgagcatcgcaggcaatgtgctgagc
aacgaccaaccgggcagcgatggcggtatccgcgtcgtttcggtcggtaccgtcgccggc
accttcggtcagctggttctcaatgccgacggtacctacagctatgcgcttaacagcagc
ctgccggccgtacagggcctggacgacggcgaaaccctcaccgagaccttcacctacacc
atgcaggacgccgacggcgatccgtccagcgcaacgctgaccatcaccatcaccggcagc
aacgacggcccgaccctgagccttgtcgccaccgacagcctcgtcgacgaagccggcctg
agcagcggctcggcggcggccggcgacggtgagttcgcctccggcagcttcaccctggcc
gacaccgatggcctggacgacctgcagagcgtgaccatcaacggcaagaccgtggcgatt
ggtgacctgcagggcgagaccttcgccggcgaccacggcaccctgacggtcactgcctac
aacgccgccaccggcgtggcgagctacacctacgaactgaccgaagcgaccaccgacggc
gccggcaccgagaccgacaccttcagcctgagcgtgaccgacggcaccggcagctcgacc
ccggccagcctggtcatcgaaatcgtcgacgacgtcccgcacgccgtggccgacagcgcc
agcgtgggcgaggacagcgtcaccgcgatcaccggcaacgtgctgaccaacgacctgcac
gccaacggccagccgggcgccgacaccccgaccagcttcgtcaactggaccagcaccacg
gcggcgcacggcaccttcaccgacctgggcggcggcaactacagctacctgatcaacccg
gccgatgccgcggtacagggcctggacgagggtgaaaccctcaccgaaaccttcacctac
accatgcaggacgccgacggcgacccgtccagcgcaacgctgaccatcaccatcaccggc
agcaacgacggcccgaccctgagccttgtcgccaccgacagcctcgttgacgaagccggc
ctgagcagcggctcggcggcggccggcgacggcgagttcgcctccggcagcttcaccctg
gccgacaccgatggcctggacgacctgcagagcgtgaccatcaacggcaagaccgtggcg
attggtgacctgcagggcgagaccttcgccggtgaccacggcaccctgacggtcaccgcc
tacaacgccgccaccggcgtggcgagctacacctacgaactgaccgaagcgaccaccgac
ggcgccggcaccgagaccgacaccttcagcctgagcgtgaccgacggcagcggcagctcg
accccggccagcctggtcatcgaaatcgtcgacgacgtcccgcacgccgtggccgacagc
gccagcgtgggcgaggacagcgtcaccgcgatcaccggcaacgtgctgaccaacgacctg
cacgccaacggccagccgggtgccgacaccccgaccagcttcgtcaactggaccagcacc
acggcgacgcacggcaccttcaccgacctgggcggcggcaactacagctacctgatcaac
ccggccgatgccgcggtacagggcctggacgaaggcgaaaccctcaccgaaaccttcacc
tacaccatgcaggacgccgacggcgatccgtccagcgcaacgctgaccatcaccatcacc
ggcagcaacgacggcccgaccctgagccttgtcgccaccgacagcctcgttgacgaagcc
ggcctgagcagcggctcggcggcggccggcgacggcgagttcgcctccggcagcttcacc
ctggccgacaccgatggcctggacgacctgcagagcgtgaccatcaacggcaagaccgtg
gcgattggtgacctgcagggcgagaccttcgccggtgaccacggcaccctgacggtcacc
gcctacaacgccgccaccggcgtggcgagctacacctacgaactgaccgaagcgaccacc
gacggcgccggcaccgagaccgacaccttcagcctgagcgtgaccgacggcaccggcagc
tcgaccccggccagcctggtcatcgaaatcgtcgacgacgtcccgcacgccgtggccgac
agcgccagcgtgggcgaggacagcgtcaccgcgatcaccggcaacgtgctgaccaacgac
ctgcacgccaacggccagccgggcgccgacaccccgaccagcttcgtcaactggaccagc
accacggcgacgcacggcaccttcaccgacctgggcggtggcaactacagctacctgatc
aacccggccgatgccgcggtgcagggcctggacgaaggtgaaaccctcaccgaaaccttc
acctacaccatgcaggacgccgacggcgatccgtccagcgcaacgctgaccatcaccatc
accggcagcaacgacggcccgaccctgagccttgtcgccaccgacagcctcgttgacgaa
gccggcctgagcagcggctcggcggcggccggcgacggcgagttcgcctccggcagcttc
accctggccgacaccgatggcctggacgacctgcagagcgtgaccatcaacggcaagacc
gtggcgattggtgacctgcagggcgagaccttcgccggtgaccacggcaccctgacggtc
accgcctacaacgccgccaccggcgtggcgagctacacctacgaactgaccgaagcgacc
accgacggcgccggcaccgagaccgacaccttcagcctgagcgtgaccgacggcaccggc
agctcgaccccggccagcctggtcatcgaaatcgtcgacgacgtcccgcacgccgtggcc
gacagcgccagcgtgggcgaggacagcgtcaccgcgatcaccggcaacgtgctgaccaac
gacctgcacgccaacggccagccgggcgccgacaccccgaccagcttcgtcaactggacc
agcaccacggcggcgcacggcaccttcaccgacctgggcggcggcaactacagctacctg
atcaacccggccgatgccgcggtacagggcctggacgagggtgaaaccctcaccgaaacc
ttcacctacaccatgcaggacgccgacggcgacccgtccagcgcaacgctgaccatcacc
atcaccggcagcaacgacggcccgaccctgagcctcgtcgccaccgacagcctcgtcgac
gaagccggcctgagcagcggctcggcggcggccggcgacggcgagttcgcctccggcagc
ttcaccctggccgacaccgatggcctggacgacctgcagagcgtgaccatcaacggcaag
accgtggcgattggtgacctgcagggcgagaccttcgccggcgaccacggcaccctgacg
gtcaccgcctacaacgccgccaccggcgtggcgagctacacctacgaactgaccgaagcg
accaccgacggcgccggcaccgagaccgacactttcagcctgagcgtgaccgacggcacc
ggcagctcgaccccggccagcctggtcatcgaaatcgtcgacgacgtcccgcacgccgtg
gccgacagcgccagcgtgggcgaggacagcgtcaccgcgatcaccggcaacgtgctgacc
aacgacctgcacgccaacggccagccgggcgccgacaccccgaccagcttcgtcaactgg
accagcaccacggcggcgcacggcaccttcaccgacctgggcggcggcaactacagctac
ctgatcaacccggccgatgccgcggtgcagggcctggacgagggcgaaaccctcaccgaa
accttcacctacaccatgcaggacgccgacggcgatccgtccagcgcaacgctgaccatc
accatcactggcagcaacgacggcccgaccctgagcgtcgtgggggccaacgtctccgag
ctcggcttgccgtccggctcggatgccacgggctacagcgaatttgccacgggtaccttc
acgctgggcgatgtggatggcctggacgacatccagaccgtcacgatcggcggtaccgcg
gtgaatattgccaatctgatcggcagtagttttgccggcgcgtacggtgtgctgaacatc
ctcggctacaacgacgagacgggtgtggtcagctatcagtaccagttgaccagtccgacc
accgatgtggatggcgtgacggaggccgataccttcacgatcagcgtgtcggacggcgcg
gccagtacgtcgagcgatctggttatcggtatcgccgatgatctgccgtcgcttggtgct
tttgtcgccgcgacgattcccaacgaagtcggcacggtcaacggcacctttgcggtagta
ccgggggcggatgggctgggcggcttcgagatcaccgggccgacgctggacggcgtgacc
tatcagaccacgcagaatttcagcggtggcacgttcgtcagcaccacgctcacggcgctg
acggacaccaaccaacaggtctttaccttgacggtgagcgcagacggcacctacagcttc
cagctgatcgcgccggaggcgggttacaccgaggccatcgactttacgagcctggaacct
ggcaagccgatttccgtggcgtccagcatcgagaatggttggacgttcgacggcctgctg
ttcagcggaacctccccaacgacatttaccaaccccgatagcggcagcggctccaatagc
gatctgctcaacatctcgggaaatgggttcggcttggggagtgcgagctccgttccggac
aacgccggtttcctctacacccagcagggcggcgcggatagcttgcgtttcttcgccgat
atttcatcgagcctggaaggaaagggcactgtacagatttcctgggctgcctatggcagc
accgtcggcggtacgccgctggccgtcagcacgcagagcataacgctcaccgcagacgga
tgggtcaccatcgacccgggcgtctcgttcgagaatctggtggtacgtgtcgacgtgatc
ggcgcgaacactggcggcatccgggtgcaggatttctcctattcccgtgaagtgctgccg
gacgaccagagtctgtccttcggcatcgtggcgcaggacggtgatggcgacctgagtgcg
ccgtctaccctcgatgtacagattacggcggccgactcgtcagatgccttcaccctgatc
ggaacggcaggcgacgatgtcatcgccgccagcagcctgaccgacagcatcagcggcaac
accggcttcgatatcgtcgactacggcgacgcgaccacggccattgcggccagcctgctc
agcgggacgggcacgctgggggacgcactcggtgatagctacacgggcatcgaaggcctc
gccggcggggcgggcgacgacgtgctgaccggcaatacgctggacaactacctggccggc
ggcgctggcagcgatacgctggtgggcggtgagggcgacgatgttctcgacggcgggatc
ggagccgacattctgcagggcggtatcggcgatgacgtgctgatcggcggggcaggaacg
gacgcgctggaaggtggctccggcatggacatcgccgattacagcgccgacggcgtcggc
atcacggtcgatctggagagcggcgcaccgggtattggcggcctggctgcgggtgatacc
tacctcgacatggagggcgtgataggcggcagcggcgacgatctgctggctggcgacacg
caggacaactatctggacggcgggctgggcgacgacgtcctctccggtggtggtggcgac
gacgtcctgatcggcgggttgggtgacgacagcatgaccggcggcgccggccgtgacacc
ttcgtctggcgggcgggtgacaatggcagcgataccatcagcgacttccatatcgacccg
gccggtgtcacctcggacgtgctcgatctgtcggagctgctgtccggagtggatgccgac
agcgctacgctggacaattacctgacgttcgccttcggcaacgacacggtcatttcggtc
agcgttacgccgggcggtgcgccggtgcaggacattaccctggccggtgtggatctggca
gatctgtacggcaccaccaacgaggcggcggtgatcgacagcctgcttgccgacaacgcc
ctgaaggtcgacaacacctga
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integrated database retrieval system
