Stutzerimonas degradans: GOM96_17360
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Entry
GOM96_17360 CDS
T08431
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
sdeg
Stutzerimonas degradans
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdeg03032
]
GOM96_17360 (ihfB)
03036 Chromosome and associated proteins [BR:
sdeg03036
]
GOM96_17360 (ihfB)
03400 DNA repair and recombination proteins [BR:
sdeg03400
]
GOM96_17360 (ihfB)
DNA replication proteins [BR:
sdeg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GOM96_17360 (ihfB)
Chromosome and associated proteins [BR:
sdeg03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
GOM96_17360 (ihfB)
DNA repair and recombination proteins [BR:
sdeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
GOM96_17360 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
CATASP
Motif
Other DBs
NCBI-ProteinID:
QGW22694
LinkDB
All DBs
Position
3688016..3688297
Genome browser
AA seq
93 aa
AA seq
DB search
MTKSELIERIVTQQGMLSSKDVELAIKTMLEQMAQALATGDRIEIRGFGSFSLHYRAPRV
GRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEE
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcggagttgatcgagcgtatcgtcacccagcaggggatgctttcttcgaag
gatgtcgagctggccatcaagaccatgctcgagcagatggcacaggcgctggccactggc
gaccgcatcgagattcgcggtttcggcagcttctccctccactaccgcgccccccgcgta
ggccgaaatcccaagaccggccagtccgtcagcctggatggcaagttcgtcccgcatttc
aagccggggaaggagttgcgggatcgggtgaatgaggagtaa
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integrated database retrieval system
