Stutzerimonas degradans: GOM96_18190
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Entry
GOM96_18190 CDS
T08431
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg00071
Fatty acid degradation
sdeg00280
Valine, leucine and isoleucine degradation
sdeg00310
Lysine degradation
sdeg00362
Benzoate degradation
sdeg00380
Tryptophan metabolism
sdeg00410
beta-Alanine metabolism
sdeg00640
Propanoate metabolism
sdeg00650
Butanoate metabolism
sdeg00907
Pinene, camphor and geraniol degradation
sdeg00930
Caprolactam degradation
sdeg01100
Metabolic pathways
sdeg01110
Biosynthesis of secondary metabolites
sdeg01120
Microbial metabolism in diverse environments
sdeg01200
Carbon metabolism
sdeg01212
Fatty acid metabolism
Module
sdeg_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
GOM96_18190 (fadB)
00650 Butanoate metabolism
GOM96_18190 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
GOM96_18190 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
GOM96_18190 (fadB)
00310 Lysine degradation
GOM96_18190 (fadB)
00380 Tryptophan metabolism
GOM96_18190 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
GOM96_18190 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
GOM96_18190 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
GOM96_18190 (fadB)
00930 Caprolactam degradation
GOM96_18190 (fadB)
Enzymes [BR:
sdeg01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
GOM96_18190 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
GOM96_18190 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
GOM96_18190 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
GOM96_18190 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QGW22844
LinkDB
All DBs
Position
3860437..3862584
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRQAVDALKADASVKGVIVTS
GKDVFIVGADITEFVDNFKLPDEELVAGNLEANKIFSDFEDLGVPTVVAINGIALGGGFE
MCMSADYRVMSSAAKVGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGKENGAEDAL
KVHAVDAVVAPEKLQEAALDLVKRAISGELDYKAKRQPKLDKLKLNAIEQMMAFETTKAF
VAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTSVAESLIGLFLSDQEL
KKKAKAYDKQARDVKLAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEGIQMGLDEASKL
LGKRVEKGRLTPEKMAQALNAIRPTMSYGDFGNVDIVVEAVVENPKVKHAVLAEVEGHVR
EDAIIASNTSTISISYLAQALKRPENFCGMHFFNPVHMMPLVEVIRGEKTSETAIATTVA
YAKKMGKSPVVVNDCPGFLVNRVLFPYFGGFARAIAHGVDFVRADKVMEKFGWPMGPAYL
MDVVGMDTGHHGRDVMAEGFPDRMKDDTRTAVDVMYDSNRLGQKNGKGFYAYEMDKKGKP
KKVVDPQAYELLKPIVAETRELSDEDIINYMMIPLCLETVRCLEDGIVETAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVAMADKYADLGPLYHPTAKLREMAANGQRFYG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgagagcggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaataaattcaatcgcctcactctcaacgaactc
cgtcaggcggtcgacgccctcaaggccgatgcatcggtcaagggcgtgatcgtcaccagc
ggcaaggacgtattcatcgtcggtgccgatatcaccgagttcgtcgacaacttcaagctg
cccgacgaggagctggtcgccggcaacctcgaagccaacaagatcttcagcgatttcgag
gacctgggcgtgcccaccgtggttgccatcaacggcatcgccttgggtggcggtttcgag
atgtgcatgtctgccgattaccgcgtcatgtccagcgccgccaaggttggcctgccggaa
gtgaagctgggcatctacccgggcttcggcggtaccgtccgcctgccgcgcctgatcggt
gtcgataacgccgtcgagtggatcgcgtcaggcaaggaaaacggtgccgaagacgcgctc
aaggtgcacgcggtcgatgccgtcgtcgctccggaaaaactgcaggaagcggcactggat
ctggtcaagcgcgccatctccggtgagctggattacaaggccaagcgccagccgaagctg
gacaagctcaagctcaacgccattgagcagatgatggcgttcgagaccaccaaggccttc
gtggccggccaggccggcccgaactacccggcgccggtcgaagccatcaagagcatccag
aaagccgccaacttcggccgtgacaaggcgctggaagtcgaggccgccggcttcgtcaaa
ctggccaagacttcggttgccgaaagcctgatcggcctgttcctcagcgatcaggagctg
aagaagaaggccaaggcttacgacaagcaggcgcgcgacgtgaaactggctgccgtgctg
ggcgccggcatcatgggtggcggcatcgcctaccagtcggccgtcaagggcacgccgatc
ctgatgaaggatatccgcgaagagggtatccagatgggtctggacgaggcctccaagctg
ctcggcaagcgcgtcgagaagggccgtctgactccggagaagatggcgcaggcgctcaac
gcgatccgcccgaccatgtcctacggcgatttcggcaacgtcgacatcgttgtcgaggcc
gtggtcgagaacccgaaggtcaagcacgccgtgctggccgaggtcgaaggccacgttcgc
gaagacgcgatcatcgcctccaacacctccacaatctccatcagctacctggcccaggcg
ctcaagcgtccggaaaacttctgcggcatgcacttcttcaacccggtacacatgatgccg
ctggtggaagtgatccgtggcgaaaagaccagcgaaaccgccatcgccaccaccgtcgcc
tacgccaagaagatgggcaagagcccggtcgtggtcaatgattgcccgggcttcttggtc
aaccgcgtgctgttcccgtacttcggtggttttgcccgcgccatcgcccacggtgtcgac
ttcgttcgcgccgacaaggtgatggagaagttcggctggcccatgggtccggcttatctg
atggacgtcgtcggcatggacaccggccaccacggccgtgacgtgatggccgaaggcttc
ccggatcgcatgaaggacgatacccgcaccgccgtcgacgtcatgtacgactccaaccgc
ctcggtcagaagaacggcaagggcttctatgcctacgagatggacaagaagggcaagccg
aagaaggtcgtcgacccgcaggcctacgagctgctcaagccgatcgtcgccgagacgcgc
gagctgtccgacgaggacatcatcaactacatgatgatcccgctgtgcctggaaaccgtg
cgctgcctggaagacggcatcgtcgagaccgctgccgaagccgacatgggcctgatctat
ggcattggcttcccacccttccgtggtggtgcgctgcgctacatcgattcgatcggcgtc
gccgagttcgtcgcgatggccgacaagtacgccgacctgggcccgctgtaccacccgacc
gcgaagctgcgtgagatggctgccaacggccagcgcttctacggttaa
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