Streptococcus dentalis: SM121_03430
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Entry
SM121_03430 CDS
T10629
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sden Streptococcus dentalis
Pathway
sden03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sden00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SM121_03430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sden03400
]
SM121_03430
Enzymes [BR:
sden01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SM121_03430
DNA repair and recombination proteins [BR:
sden03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SM121_03430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
AAA_11
Viral_helicase1
UvrD-helicase
DEAD
HHH_5
AAA_22
UvrD_C
nSTAND3
Herpes_Helicase
RsgA_GTPase
AAA_28
AAA_29
5_3_exonuc
TsaE
SLFN-g3_helicase
AAA_25
TrwB_AAD_bind
NPHP3_N
PIF1
Motif
Other DBs
NCBI-ProteinID:
WPS54835
LinkDB
All DBs
Position
complement(707622..710054)
Genome browser
AA seq
810 aa
AA seq
DB search
MEYYFSGTIERIIFENPSSFFRILLLDISDTDAEDFDDFEIIVTGTMADIMEGEDYTFWG
ELVHHPKYGEQLKINRYERAKPSSKGLVKYFSSDHFKGIGLKTAQKIVDLYGDNTIDKIL
EAPEKLEDITGLSKKNRLAFVEKLRQNYGAERILAQLANYGIPNKLAFQIQDFYKEETLQ
IVEQQPYRLVEDIQGMGFKIADQLAEELGIASDAPERFRAGLIHSLFSYSIETGNTYIEA
KDLLRYTIDLLESARPVELDPSTVAQELGRLIEEDKVQNVDTKIFDNSLFFAEEGIRSHI
GRLLEKGKQASFDPEKINQEIEAVEKDLGIRYDAIQKEAIHQAIQNKVFILTGGPGTGKT
TVINGMISVYAQLHQLDLRKKQDLPILLAAPTGRAARRMNELTGLPSATIHRHLGMTGDD
DTSHLDDYLDADFIIVDEFSMVDTWLANQLLSNIATDTKLLIVGDADQLPSVSPGQVLAD
LLQIPSIPQTKLEHIFRQSEDSTIVSLAGDIRQGKLPQDFTERKADRSYFEAGSEHIPKM
IEQITSAALRSHIPARDIQVLAPMYKGQAGIDNINTLMQDLLNPAVKDQVVFDTPDCQYR
DGDKVIHLVNDAESNVFNGDIGYITDLLPGKYTESKQDELTIQFDGNEIVYPRNEWYKIR
LAYAMSIHKSQGSEFPVVILPITNQSHRMLQRNLIYTAITRSKSKLILLGEYSAFNYATK
NTGTARKTYLVERFKDLDGGEATNVSSSAVATASATVESARSKEETVKRKDEPDEPTVYR
LTEDNLHTISPMIGLTEEEIAAFFDIKKYD
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggaatattatttttctggtactattgagcgtattatttttgaaaatcctagcagtttt
tttcgaatcctcttactcgacatcagcgatacagatgccgaagactttgatgattttgag
atcattgtaacgggcactatggcagatattatggaaggcgaagactatactttctggggg
gagctggtccatcatcctaaatacggagaacagctcaaaatcaatcgctatgaacgtgct
aaaccctctagcaagggcttggtgaaatatttttccagcgatcacttcaaaggaattggg
ctcaaaacggctcaaaaaatcgtggacctctatggagacaataccattgacaaaattctg
gaggcccctgaaaaattagaagatatcactggtctctccaagaaaaaccgcctggctttt
gtagaaaaactccgtcagaattacggagcagagcgcattctcgcccaactagccaactat
ggcattcccaataaattggcctttcagatccaagatttttataaagaagaaaccctccag
atcgtggagcaacagccctaccgattggtggaagatatccaaggcatgggctttaaaatc
gcggaccaactagccgaagaattggggattgcaagtgacgcccctgagcgtttccgcgcg
ggtctgatccacagcctttttagctactctatcgagactggaaatacctacatcgaagcc
aaagacctcctgcgctataccattgaccttttagaatccgctcggccagtagaattggac
ccttccactgtcgcccaagaattaggacgcctcatcgaggaagacaaggtccaaaacgtg
gacaccaagatctttgacaatagcctcttctttgcggaggaagggattcgcagtcatatc
ggtcgcctcctagaaaaaggaaagcaagcttcatttgaccctgagaaaatcaaccaggag
attgaggcggttgaaaaagatttggggattcgctacgatgcgattcaaaaagaggcgatt
caccaagctatccaaaacaaggtctttatcctcacagggggtcctgggacaggaaagact
accgttatcaatgggatgatcagtgtctatgcccaactccaccagctggatcttcggaag
aaacaagacctgccgatcctcttggctgccccaacgggacgggcagctagacgcatgaat
gagctgacaggacttccgagtgccaccatccaccgccatttggggatgacaggagatgat
gacaccagccacttggatgactatttagacgcagactttatcattgtggatgaattttcc
atggttgatacctggctggctaatcaattactcagtaatatcgcaacggatacgaaactc
ttgattgtgggagatgccgaccaattaccatctgtcagccctggtcaggtcttggctgat
ctcttgcagatcccaagcatccctcagaccaaactcgaacatattttccgtcagagtgag
gactcgaccattgtctcactagcaggagacattcgccaaggcaagcttcctcaagatttc
acagaacgaaaagccgaccgctcttatttcgaagctggaagcgaacacatccctaagatg
atcgaacaaatcacttctgctgcccttcgcagtcatatccctgcacgagatatccaagtc
ttggcacccatgtacaagggccaggccggcattgacaatatcaatacgctcatgcaagac
cttctcaatccagctgtcaaagatcaggtggtttttgacacgccagactgccaataccgc
gatggagacaaggtcatccatctggtcaatgatgcagaaagcaatgtctttaacggagat
atcggctacatcaccgatcttctcccaggaaaatatacagaatccaagcaagatgaattg
accatccaatttgatggtaatgaaatcgtctatccgcgcaatgaatggtacaagattcgc
ttagcttatgcgatgagtattcacaaatcgcaaggaagtgagtttccggtagtgattttg
cccattaccaatcaaagccaccggatgttgcagcgtaatttgatctataccgccatcacg
cgctctaagagcaagctgattctcttaggagaatacagcgcctttaattacgctactaaa
aataccggtactgcgcgcaagacctacttggtggagcgcttcaaggacctggacggaggc
gaagccaccaatgtctcatcttcagccgttgccaccgcttctgctacagtcgaatccgca
cgaagcaaggaagaaactgttaaaaggaaggatgagcctgatgaaccgactgtctatcga
ctgacagaagacaatctccacaccatttctcctatgatcggactgactgaagaagagatt
gcagccttttttgacatcaaaaaatacgactag
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