Streptococcus dentalis: SM121_08005
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Entry
SM121_08005 CDS
T10629
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sden Streptococcus dentalis
Brite
KEGG Orthology (KO) [BR:
sden00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sden03016
]
SM121_08005 (truB)
Enzymes [BR:
sden01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SM121_08005 (truB)
Transfer RNA biogenesis [BR:
sden03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SM121_08005 (truB)
Prokaryotic type
SM121_08005 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
WPS53646
LinkDB
All DBs
Position
complement(1630460..1631356)
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AA seq
298 aa
AA seq
DB search
MDGIINVKKEAGMTSHDVVFKLRKILGTKKIGHGGTLDPDVVGVLPIAVGKATRMVEFMQ
DEGKIYEGEITLGFSTTTEDANGEVVERTPVEAPLDAEEVDRMIAQMVGEIEQVPPMYSA
VKVNGRKLYEYARAGEEVERPVRQVTIYEFTRTSEIGYETGLARFRFRVKCSKGTYIRTL
SVDLGQKLGYAAHMSYLTRTSAAGLSLDDALTLEEVAEKVAQGDLSFLHPLEIGTGDLEK
VELTVEEVGEVQVGRFISVESEARELAAFYQGKLVAILEKREELYKPRKVFLTESVLQ
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggacggaattatcaatgtaaaaaaagaagcaggcatgacctcacatgatgtggtcttt
aaactgcggaaaatcttaggaaccaagaagattggtcatggaggaactctggacccggat
gtggtgggggtgcttccgattgccgtaggaaaagcgacccggatggttgaatttatgcag
gatgaggggaaaatttacgagggagaaatcactttgggattttctaccacgacggaagat
gccaatggggaagtcgtcgagcggacgccagtggaagcccctttagatgcagaggaggtc
gatcgcatgattgcccaaatggtgggtgaaatagagcaggtaccgcccatgtattcagcg
gtcaaggtcaatgggcgtaagctctatgaatatgcgcgtgcgggtgaagaagtggaacgg
cctgtgcggcaggtgaccatttatgaattcacgcgtaccagtgagatcggctatgagaca
ggactagcccgttttcgcttccgggttaaatgtagcaagggcacctatatccggaccttg
tcggtggatttgggtcaaaagttgggttacgccgcccacatgtcctatctgacacggacc
agtgctgccggtttgtcactggatgatgccctgaccttggaagaagtggctgaaaaagta
gcccaaggagatttgagcttccttcatccacttgagattggaaccggggatcttgaaaaa
gtagagctgacagttgaagaggttggcgaagtccaagtaggacgctttatttcagttgag
agcgaagccagagagttagctgctttttaccaagggaaattggtagccattttagaaaaa
agggaagaactttacaaacctcgcaaggtttttctgacagaaagtgtgttacaataa
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