Streptococcus dentalis: SM121_09375
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Entry
SM121_09375 CDS
T10629
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sden Streptococcus dentalis
Pathway
sden03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sden00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SM121_09375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sden03019
]
SM121_09375
Messenger RNA biogenesis [BR:
sden03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SM121_09375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_PNO1_2nd
HDOD
DivIVA
KH_NusA_2nd
KH_KhpA-B
G0-G1_switch_2
KH_2
MetOD1
Motif
Other DBs
NCBI-ProteinID:
WPS53888
UniProt:
A0ABZ0SYM1
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Position
complement(1906337..1907944)
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AA seq
535 aa
AA seq
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MNLFITGVFAAVIGLVIGYVGTALKMKASKEAAELTLLNAEQEATNLRGQAEREADLILK
EAKHESSSLKKEALLEAKEEARKYREEVDAEFKSERQELKQLENRLAERASNLDRKDDIL
TSKEQSLEHKEQSLTDRTKHIDTREQQLEELEHKKVEELERVAALSQGEARDIILNQTEE
QLSKEIASRIREAELEVKERSDKIAKDILVQAMQRMAGDFVAEQTNSTVHLPDDSMKGRI
IGREGRNIRTFESLTGVDVIIDDTPEVVTLSGFDPIRREIARMTMESLLKDGRIHPARIE
ELVEKNRQEIDNRIREYGEAAAYEIGAPNLHPDLMKIMGRLQFRTSYGQNVLRHSIEVAK
LSGIIASELGENATLARRAGFLHDIGKAIDREVEGSHVEIGTELARKYKEHPVVVNTIAS
HHGDVEPESVIAVIVAAADALSAARPGARSESLESYIKRLQDLEEIANSFEGVKTSFALQ
AGREIRIMVSPEAIKDDKVTILAHDIREKIESNLEYPGNIKVTVIRELRAVDYAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgtttattacaggtgtttttgccgcggtcattggtttagtcattggatatgtg
ggaactgctcttaaaatgaaagcttcaaaagaagcagcggaactcacccttttgaatgct
gaacaagaagcaacgaatttacgtggacaggctgaacgtgaagccgatttaattttaaaa
gaggcgaagcatgagtcaagttcacttaaaaaagaagcacttttggaggcaaaggaagaa
gccagaaaatatcgtgaagaggtcgatgctgagtttaagtcagaacgacaagaattgaag
caattggaaaaccgtttggcagaacgtgctagcaatcttgatcgcaaagacgatatttta
acaagcaaagaacagtctcttgaacacaaagagcaaagtcttacagatagaactaaacac
attgatacgcgtgaacaacagctggaagagcttgaacacaagaaagtagaagaactggaa
cgtgtcgctgctctaagtcaaggagaagcgcgtgacattattttgaatcagacggaagag
caactttcaaaagaaattgcatcgcggattcgtgaagcagaactggaagtgaaagaacgt
tctgataaaattgcaaaagacattctcgtgcaagccatgcagcgaatggctggtgatttt
gttgctgagcaaacaaactcaacggttcatttgccagatgatagtatgaaagggcgcatc
atcggtcgtgaagggcgcaatattcgtacctttgagagcttgacaggtgtcgatgtgatt
atcgatgatacgccagaggtggttaccttgtcagggtttgatccgattcgtcgtgaaatt
gcccgtatgacaatggagagccttctcaaagatggtcgcatccatccagcccgcatcgaa
gagctggttgagaagaaccgtcaggaaattgacaatcgtattcgtgaatacggtgaggct
gctgcctatgaaatcggtgcaccaaacctccatccagatttgatgaaaatcatgggacgg
ttgcaattccgtacttcttatggtcaaaacgttttgcgtcactccattgaagttgccaaa
ctttctggtattattgctagcgagttgggtgaaaatgctactttggcacgacgtgcagga
ttcttacatgatatcggtaaagcgattgaccgtgaagtggaaggaagccacgtcgagatt
gggacagaattggcacggaagtacaaggagcatccagtggttgtcaataccattgctagt
caccatggtgacgtggaaccagaaagtgtcatcgcagttattgtcgctgcagcagatgcc
ttgagtgctgctcgacctggagcacgaagtgagtcacttgaaagctacatcaaacgcttg
caagatcttgaagaaattgcaaatagttttgaaggagttaagacaagtttcgcccttcaa
gcgggtcgtgaaatccgtattatggttagccctgaggcaatcaaggatgataaagtgacg
atcttggctcatgatattcgtgagaagatcgagtccaatcttgaatatcctggaaacatt
aaggttaccgttattcgagaattgcgtgcagtagattacgcaaaataa
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