KEGG   Streptococcus dentalis: SM121_09375
Entry
SM121_09375       CDS       T10629                                 
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
sden  Streptococcus dentalis
Pathway
sden03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sden00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SM121_09375
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sden03019]
    SM121_09375
Messenger RNA biogenesis [BR:sden03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SM121_09375
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 KH_PNO1_2nd HDOD DivIVA KH_NusA_2nd KH_KhpA-B G0-G1_switch_2 KH_2 MetOD1
Other DBs
NCBI-ProteinID: WPS53888
UniProt: A0ABZ0SYM1
LinkDB
Position
complement(1906337..1907944)
AA seq 535 aa
MNLFITGVFAAVIGLVIGYVGTALKMKASKEAAELTLLNAEQEATNLRGQAEREADLILK
EAKHESSSLKKEALLEAKEEARKYREEVDAEFKSERQELKQLENRLAERASNLDRKDDIL
TSKEQSLEHKEQSLTDRTKHIDTREQQLEELEHKKVEELERVAALSQGEARDIILNQTEE
QLSKEIASRIREAELEVKERSDKIAKDILVQAMQRMAGDFVAEQTNSTVHLPDDSMKGRI
IGREGRNIRTFESLTGVDVIIDDTPEVVTLSGFDPIRREIARMTMESLLKDGRIHPARIE
ELVEKNRQEIDNRIREYGEAAAYEIGAPNLHPDLMKIMGRLQFRTSYGQNVLRHSIEVAK
LSGIIASELGENATLARRAGFLHDIGKAIDREVEGSHVEIGTELARKYKEHPVVVNTIAS
HHGDVEPESVIAVIVAAADALSAARPGARSESLESYIKRLQDLEEIANSFEGVKTSFALQ
AGREIRIMVSPEAIKDDKVTILAHDIREKIESNLEYPGNIKVTVIRELRAVDYAK
NT seq 1608 nt   +upstreamnt  +downstreamnt
atgaatttgtttattacaggtgtttttgccgcggtcattggtttagtcattggatatgtg
ggaactgctcttaaaatgaaagcttcaaaagaagcagcggaactcacccttttgaatgct
gaacaagaagcaacgaatttacgtggacaggctgaacgtgaagccgatttaattttaaaa
gaggcgaagcatgagtcaagttcacttaaaaaagaagcacttttggaggcaaaggaagaa
gccagaaaatatcgtgaagaggtcgatgctgagtttaagtcagaacgacaagaattgaag
caattggaaaaccgtttggcagaacgtgctagcaatcttgatcgcaaagacgatatttta
acaagcaaagaacagtctcttgaacacaaagagcaaagtcttacagatagaactaaacac
attgatacgcgtgaacaacagctggaagagcttgaacacaagaaagtagaagaactggaa
cgtgtcgctgctctaagtcaaggagaagcgcgtgacattattttgaatcagacggaagag
caactttcaaaagaaattgcatcgcggattcgtgaagcagaactggaagtgaaagaacgt
tctgataaaattgcaaaagacattctcgtgcaagccatgcagcgaatggctggtgatttt
gttgctgagcaaacaaactcaacggttcatttgccagatgatagtatgaaagggcgcatc
atcggtcgtgaagggcgcaatattcgtacctttgagagcttgacaggtgtcgatgtgatt
atcgatgatacgccagaggtggttaccttgtcagggtttgatccgattcgtcgtgaaatt
gcccgtatgacaatggagagccttctcaaagatggtcgcatccatccagcccgcatcgaa
gagctggttgagaagaaccgtcaggaaattgacaatcgtattcgtgaatacggtgaggct
gctgcctatgaaatcggtgcaccaaacctccatccagatttgatgaaaatcatgggacgg
ttgcaattccgtacttcttatggtcaaaacgttttgcgtcactccattgaagttgccaaa
ctttctggtattattgctagcgagttgggtgaaaatgctactttggcacgacgtgcagga
ttcttacatgatatcggtaaagcgattgaccgtgaagtggaaggaagccacgtcgagatt
gggacagaattggcacggaagtacaaggagcatccagtggttgtcaataccattgctagt
caccatggtgacgtggaaccagaaagtgtcatcgcagttattgtcgctgcagcagatgcc
ttgagtgctgctcgacctggagcacgaagtgagtcacttgaaagctacatcaaacgcttg
caagatcttgaagaaattgcaaatagttttgaaggagttaagacaagtttcgcccttcaa
gcgggtcgtgaaatccgtattatggttagccctgaggcaatcaaggatgataaagtgacg
atcttggctcatgatattcgtgagaagatcgagtccaatcttgaatatcctggaaacatt
aaggttaccgttattcgagaattgcgtgcagtagattacgcaaaataa

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