Shewanella decolorationis: D0436_00605
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Entry
D0436_00605 CDS
T09167
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00061
Fatty acid biosynthesis
sdeo00071
Fatty acid degradation
sdeo01100
Metabolic pathways
sdeo01212
Fatty acid metabolism
sdeo02024
Quorum sensing
sdeo04146
Peroxisome
Module
sdeo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
D0436_00605
00071 Fatty acid degradation
D0436_00605
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
D0436_00605
09145 Cellular community - prokaryotes
02024 Quorum sensing
D0436_00605
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sdeo01004
]
D0436_00605
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdeo04147
]
D0436_00605
Enzymes [BR:
sdeo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
D0436_00605
Lipid biosynthesis proteins [BR:
sdeo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
D0436_00605
Exosome [BR:
sdeo04147
]
Exosomal proteins
Exosomal proteins of breast milk
D0436_00605
Exosomal proteins of breast cancer cells
D0436_00605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QDZ89073
UniProt:
A0A5B8QRP2
LinkDB
All DBs
Position
complement(4890533..4892326)
Genome browser
AA seq
597 aa
AA seq
DB search
MSLEQYHVIRLLQQQSQSLKEAIALEGFEMAAPWHQVSWQAFDQISHKIAQVLIELGVQV
QDRCVILSQNCPQWTCADIGILKSRAIVVPIYPTSTLEQASFIINDAAAKVIFVDDAKQY
ALACELQKQCPTLEHVIVFDASVDLAKGIAQHQHLDSLLAKEYDQSAELEQRLKDANLDD
LLTLIYTSGTTGDPKGVMLDYRNMASTVRQHDLILPFKTGDVSLAFLPLSHVFERGWSFY
VLCRGGHNVYLQNTQRVKEAISAVRPHTLCVVPRFLEKVYSAVQDKVAKSAEGRKKLFAW
AMGVGERQFEVGQGRAKGGLWLSLQWRLANKLVYSKLQAVLGGRLKFMPCGGAALDLNVA
SFFHAIGIPVLCGYGMTETNATVTCNTLDNRVAGSNGKVLPEIQIKLGKDDEILVRGDTV
MRGYYNRPEDTAAAFEDGWLKTGDAGRLDANGNLFITDRIKELMKTSNGKYIAPQRVEGT
VGRCPFIEQVAVIADARNYVTALIVPAFEALEAWAKDKGLKYESPIELLRHSHVVEHFEQ
RLKHLQQELAGFEQIKKFTLLPEAFSMEAGLITPTLKLRRKMIYHKYAHEINAMYNN
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggaacaatatcacgtaattcgactattacagcagcaaagccagtcattaaag
gaggctattgcgctggaaggttttgaaatggctgcaccttggcatcaagtcagttggcag
gcattcgatcaaatcagccataaaattgcacaggtgttgattgaacttggcgtacaagtg
caagaccgttgtgtgatcctgtcgcaaaactgtcctcaatggacctgtgctgatatcggc
attctgaaaagccgtgccattgttgtacctatctacccaaccagcaccttagagcaagcc
agctttatcattaatgatgccgcggccaaggtgatttttgtcgacgacgccaagcaatat
gcgctggcctgtgagctgcaaaaacagtgcccgaccctagagcatgtgattgtgttcgac
gcgagtgttgatctggcgaaaggcattgcccaacatcagcatttagacagcttgttagcc
aaagaatatgaccagagtgctgaacttgagcagcgcttaaaagatgctaatctcgatgat
ttgttaactctgatttatacctctggtaccaccggcgaccctaagggcgtgatgctggat
taccgcaatatggcctcgactgtgcgtcagcacgatctgattttgcctttcaaaaccggc
gatgtgtctttggctttcctaccgcttagccatgtgtttgagcgtggttggagcttctac
gtgctgtgccgtggcggccacaatgtgtatctgcaaaacactcaaagagtgaaagaggcc
atcagcgccgtgcgtccgcatactctgtgtgtggtgccacgtttcctcgagaaagtttat
agcgcagtgcaggataaggtcgctaaatccgccgaaggccgtaagaaactgttcgcctgg
gctatgggtgttggtgagcgtcagtttgaagtgggccaaggccgcgctaagggcggtttg
tggttatccttgcaatggcgtttggcgaacaaactggtttacagcaagttgcaggctgta
ctcggtggacggttaaagtttatgccctgcggtggtgctgcactcgatttaaatgtggcg
tctttcttccatgccattggtattcctgtgctttgtggttacggcatgacggaaaccaac
gccactgtgacctgtaataccctagataaccgagttgcaggatcaaacggtaaagtctta
cccgaaatccaaattaagctgggtaaggacgatgaaatcttagtccgtggtgatactgtg
atgcgcggttattacaatcgccctgaagacactgctgccgcctttgaagatggctggttg
aaaactggcgatgcgggacgacttgatgccaatggtaatttatttattactgaccgcatc
aaagagttaatgaaaacctccaacggtaagtacattgcgccgcagcgggttgagggcaca
gtgggccgttgtccttttatcgagcaagtggcggtgattgccgatgcccgtaactatgtg
acggcgttgattgtgccagcctttgaagcgctcgaagcttgggccaaggataagggcttg
aaatacgagtcacctatcgagctgctgcgtcacagccatgtggttgagcatttcgagcag
cgtttaaagcatttgcagcaagagctggcggggtttgagcaaatcaaaaagtttaccctg
ctgcccgaagctttttcgatggaggcgggattaatcacgccgacgctgaaattgcgccgc
aaaatgatttaccacaagtacgcccatgaaattaatgctatgtacaataattga
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