Shewanella decolorationis: D0436_00865
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Entry
D0436_00865 CDS
T09167
Symbol
rlmF
Name
(GenBank) 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdeo03009
]
D0436_00865 (rlmF)
Enzymes [BR:
sdeo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
D0436_00865 (rlmF)
Ribosome biogenesis [BR:
sdeo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
D0436_00865 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
QDZ89120
UniProt:
A0A5B8QR44
LinkDB
All DBs
Position
complement(4837570..4838664)
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AA seq
364 aa
AA seq
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MPKPALKTAAKPATSAAGKRGKPSAPKSVVKPQVAKPKTVSKPKAKRGEKKSLHPRNLHI
NGYDFPALMVSFPKLKTYVRPTPYGALSIDFADPLAVKNLNAALLKHHYGLAFWDIPKGA
LCPPIPGRVDYLHYLADLLFEGGKVKRSAAIHALDIGTGANGVYAILGHQVYDWQFVASD
INPQSLTNVQRIIDNNPSLQGHLSLRRQQDGKAVFKGIIQASDRFELTLCNPPFHGSLKE
ASEGSLRKVRNLQLNRGEQPKATSATLNFGGQAAELWCQGGEKQFLATMIRESQAFAEQC
LWFTSLVSKQENLKPCYQVLEKLGVDTVKTIEMQQGNKVTRVLAWSFHSQAKRLQWRNQT
VSGT
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacccgcccttaaaactgccgctaaacccgcgacctcagccgcgggtaaacgg
ggcaagccaagcgcgcctaagtcagtggtcaaaccccaagttgctaagccgaaaacggtg
agtaagcctaaggcaaagcgcggcgagaagaaaagcttacatccgcgtaatttgcatatt
aatggctatgactttccggccctgatggtgagttttcctaagctaaaaacctatgttcgg
cccacgccctatggcgccttatctatcgattttgccgatcccttagcggtaaaaaacctg
aatgcggcgctcttgaaacatcattatgggctggcattttgggatattcccaagggcgcg
ctgtgcccgccaatccctgggcgggtcgactatctacattacttggccgatctgttattt
gagggcggtaaagttaagcgctctgcggcgatccatgccttagatattggcactggggcg
aatggtgtttacgccatcctagggcatcaagtgtatgactggcagtttgtcgcctcggat
attaatcctcagtcgctcaccaatgtgcagcggattatcgacaataacccgagtttgcag
gggcacttatccttaaggcggcagcaagatggcaaggcggtctttaaggggatcattcag
gcctcagatcgcttcgagctaactctgtgtaatcctccctttcatggctcgttaaaggaa
gcgagtgaaggctcgctgcgcaaggtgcgtaatctgcaacttaatcgtggcgagcagcct
aaagcgaccagcgcgaccttaaactttggtggtcaggcggcggagttatggtgccaaggg
ggagaaaagcaatttttagccactatgatccgcgagagccaagcgtttgccgagcagtgt
ttgtggtttaccagcttagtgtcgaagcaggagaaccttaagccttgttatcaggttttg
gaaaagttgggtgtggataccgtaaaaaccattgagatgcagcagggtaataaggtcact
cgggtgctcgcatggagtttccattcgcaggctaaacgtttgcagtggcgaaatcagaca
gttagcggaacataa
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