Shewanella decolorationis: D0436_01195
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Entry
D0436_01195 CDS
T09167
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdeo03016
]
D0436_01195 (trmA)
Enzymes [BR:
sdeo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
D0436_01195 (trmA)
Transfer RNA biogenesis [BR:
sdeo03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
D0436_01195 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_4
Methyltransf_25
Methyltransf_15
PrmA
MTS
Methyltransf_31
Methyltransf_11
TRM5-TYW2_MTfase
DREV
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
QDZ89185
UniProt:
A0A5B8QSH9
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All DBs
Position
4758855..4759952
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AA seq
365 aa
AA seq
DB search
MNLAAMDPTTYDAQLTAKRIKLEQAFAQFETPSVEVFASEPAHYRMRAEFRVWHEGDDLY
YYMFDKVLNDKVRCDQYLPASALINQMMAALIAELKPNHSLRHKLFQVDFLSTLSGEILV
SLLYHRQLDDQWRSEAAALKARLSSQFKVNIIGRARKQKIDLDKDFVVESLQVNDKVFHY
KQIENSFTQPNAKVAIKMLEWAIDVTQRSQGDLLELYCGNGNFSIALAQNFNRVLATELA
KPSVDAAQYNIEVNNIDNLQIIRMSAEEFSDAMAKKRSFRRLEGIDLDSYVCNTIFVDPP
RAGIDPATLELVQGYERILYISCNPDTLKDNLQQLNQTHKVTRFALFDQFPYTDHMETGV
LLERR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaacttagcagcaatggatcccacgacctatgatgcgcaactaactgcaaagcgtatc
aagctagagcaggcctttgcccaatttgagacaccgagtgttgaagtgtttgcctcagaa
cctgcccactatcggatgcgcgccgagtttcgcgtatggcacgaaggcgacgatttatac
tattacatgttcgataaagtattgaacgacaaagttcgttgcgatcaatacttacccgcg
agcgcgttaatcaatcagatgatggcggcgctgatcgccgagttaaaaccgaaccacagc
ctacgtcataaactcttccaagttgattttttatcaacgctcagcggtgagattctagtg
tcactactgtatcacagacagcttgatgaccaatggcgcagcgaagccgctgcacttaaa
gccagattgagcagccaatttaaggtcaacatcattggccgtgcgcgcaaacagaaaatc
gatttagataaagactttgtggttgagtcactgcaagtgaatgacaaagttttccattac
aaacaaatcgaaaacagctttacccagccaaatgccaaggtggcaatcaagatgttggaa
tgggctatcgacgtgactcaacgcagccaaggcgatttactggagctttactgtggtaat
ggcaacttctccatcgcgctggcacaaaactttaatcgcgtgctcgcaaccgagttagct
aaaccttcggtggatgcagcccagtacaatatcgaagtcaacaatatcgataatctgcag
attatccgtatgtcggcggaagaatttagcgatgcgatggcgaaaaaacgcagctttaga
cgcttagaaggcatagatctggacagctatgtctgcaacaccatttttgtcgacccacca
cgagcaggtatcgaccctgcgacgttggagttagtgcaaggttatgagcggatcctgtat
atctcttgtaatcccgacaccctgaaagacaatttgcagcaattaaatcagacccataaa
gtcactcgttttgccctgttcgatcagttcccttacaccgaccatatggaaacaggtgta
ctgctagagcgtcgttaa
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