Shewanella decolorationis: D0436_01635
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Entry
D0436_01635 CDS
T09167
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
D0436_01635 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdeo01007
]
D0436_01635 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdeo03016
]
D0436_01635 (trpS)
Enzymes [BR:
sdeo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
D0436_01635 (trpS)
Amino acid related enzymes [BR:
sdeo01007
]
Aminoacyl-tRNA synthetase
Class I (G)
D0436_01635 (trpS)
Transfer RNA biogenesis [BR:
sdeo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
D0436_01635 (trpS)
Prokaryotic type
D0436_01635 (trpS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA-synt_2_TM
Motif
Other DBs
NCBI-ProteinID:
QDZ89265
LinkDB
All DBs
Position
358277..359275
Genome browser
AA seq
332 aa
AA seq
DB search
MTKPIVLSGAQPSGELTIGNYMGALRQWVAMQDSHDCLYCVVDLHAITVRQDPQALREAC
LDTLALYLACGVDPKKSTVFIQSQVPQHTQLGWALNCYTQMGELSRMTQFKDKSQKHANN
INVGLFGYPVLMAADILLYQANEIPVGQDQKQHLELTRDIATRFNNAYGETFTIPEPFIP
EHGAKVMSLQDPLKKMSKSDDNRNNVIGLLEDPKAVMKKLKKAMTDSDEPPVVRFDMENK
PGVSNLLSLMSGITGQSIASLEAEFEGKMYGHLKGAAGEAVVGMLEPLQERYRALRADRA
YLDQVMKAGAENAQARAEVTLKKVYEKIGLLV
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaacccatagtactcagcggtgcacagccgtccggcgaattaaccataggtaac
tacatgggtgcattgcgtcagtgggttgccatgcaagatagccacgactgcctatattgc
gtggtggacttgcatgccattactgtgcgccaagaccctcaagcattgcgtgaagcctgt
ttagatacgcttgcactgtatttagcctgcggtgtcgatccaaagaagagcacagtgttt
atccaatctcaagtgccacagcacacccagttgggttgggcgttaaattgctacacccaa
atgggtgaattgagccgtatgacgcagtttaaggataagtcacaaaagcacgccaacaat
attaacgtcggtctgtttggttatccggtgttgatggcggcggatattctgctgtatcaa
gcaaatgaaatcccagtcggtcaagaccagaagcaacatcttgaattaactcgtgatatt
gcgactcgctttaacaacgcttacggcgagacgtttaccattcctgagccttttatccct
gagcatggcgctaaggtgatgtcgcttcaggatccgctgaagaagatgtctaagtcggat
gacaaccgtaacaacgtaattggtctgcttgaagatccaaaagcggtcatgaaaaagctg
aaaaaagccatgaccgacagtgacgagccgccagtcgtgcgtttcgatatggaaaacaag
ccaggcgtatctaacctgttgagtttaatgtcgggtatcacgggtcaaagcattgccagc
ctcgaagctgagtttgaaggcaagatgtatggtcacttaaaaggtgccgcgggtgaagca
gtcgtgggcatgttagagccgctgcaagagcgttaccgtgcgctgcgtgctgaccgtgct
tacctcgaccaagtgatgaaagctggcgctgaaaatgcccaggctcgcgccgaagtaacg
cttaaaaaggtgtacgagaagattggtttgttagtgtaa
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