Shewanella decolorationis: D0436_02100
Help
Entry
D0436_02100 CDS
T09167
Name
(GenBank) winged helix DNA-binding domain-containing protein
KO
K09927
uncharacterized protein
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
D0436_02100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkZ-like
WHD_3rd_Lhr
Rod_cone_degen
Motif
Other DBs
NCBI-ProteinID:
QDZ89346
UniProt:
A0A5B8QTV6
LinkDB
All DBs
Position
495371..496537
Genome browser
AA seq
388 aa
AA seq
DB search
MSSPFSPREWLQLNMQQQGLLQPQASVSELISRLGYVQIDSINVVERAHHHVLHSRMPQY
QPQMLDTALAQEEIFEYWSHAAAYLPIADYRFSLQRKQLLQNGGKHWFEPDDKVMQEVCA
RIRAEGPLKASDFEHTEGKNGAWWDWKPAKKALEQLFMRGELMVVRREKFQKCYDLTERV
LPSHINTQAPSESEFARHLIERYLDAHAFGSAAQIAYLRKGIKANVNEQLAAMQSQGELA
SFKAEGQWYFYRPELQITAALPNRVWLLNPFDNLLIQRQRLKQWFDFDYQIEVYVPAEKR
QYGYYSLAILWRDRFVGRVDVKAERQSGLLLLQQLTLEEGFSGMDDDFCAAFEAAVTEYA
RFNGCSRWKLVKANHKAFKQKYARQQKT
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagccctttttcaccccgcgagtggttacagctaaatatgcaacagcaaggttta
ctgcagcctcaggcttcagttagcgagctgattagccgccttggttatgtgcaaattgac
tctatcaatgtggttgaacgggcacatcaccatgtattgcatagccggatgccgcagtat
caaccgcagatgctagatactgcgctggcgcaggaggagatttttgaatattggtcccat
gcggcggcctatctgccgattgccgattatcgctttagtttgcagcgtaaacagctgcta
caaaatggcggaaaacattggtttgagccagacgataaggtgatgcaggaagtgtgcgcc
cgcattcgcgccgaagggccactcaaggctagtgactttgaacataccgaaggtaaaaac
ggcgcctggtgggactggaaacccgccaaaaaggcgctagagcagttgtttatgcgcggc
gagctaatggtggtgcggcgggagaaatttcaaaagtgctatgatttgacggaacgtgtg
ttgcctagtcatatcaatacccaagcgccgagcgagagcgaatttgctcgccatttgatt
gaacgttatctcgatgcccatgcctttggctcagcggcacaaatcgcttatctgcgcaaa
ggcataaaagctaatgtgaatgagcaattagccgctatgcagtctcagggtgagttggca
agctttaaggccgaagggcaatggtatttttatcgccccgagctgcaaataaccgctgcg
ctacccaaccgtgtctggctactcaatcccttcgataatctattaattcagcggcaacga
ttaaagcaatggtttgattttgattatcaaattgaagtctatgtgcccgccgaaaaacgc
caatatggctattactccctcgcaattttgtggcgtgaccgcttcgtgggtcgagtggat
gtgaaagccgagcggcaaagcggtttgctgctattacaacagctgaccttagaagaggga
tttagcggcatggatgatgacttttgcgcagcatttgaggcggcagtcactgagtatgcg
cgctttaatggctgtagccgttggaaactggtgaaggctaaccataaggcatttaaacaa
aaatacgcacggcagcagaagacctaa
DBGET
integrated database retrieval system
