KEGG   Shewanella decolorationis: D0436_02135
Entry
D0436_02135       CDS       T09167                                 
Symbol
rep
Name
(GenBank) DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
sdeo  Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:sdeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdeo03400]
    D0436_02135 (rep)
Enzymes [BR:sdeo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     D0436_02135 (rep)
DNA repair and recombination proteins [BR:sdeo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    D0436_02135 (rep)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 AAA_12 PhoH AAA_11
Other DBs
NCBI-ProteinID: QDZ89353
UniProt: A0A5B8QSF4
LinkDB
Position
503052..505067
AA seq 671 aa
MKLNPAQNDAVHYVSGPCLVLAGAGSGKTRVIINKIAYLVQKCGYNARNIAAVTFTNKAA
REMKERVAQSMGRKEARGLWISTFHTLGLEIVKREHKVLGLKPGFSLFDDQDTLALLKEL
TQKELQEDKDLLKALAGAISNWKGGLIIPDQARKLAKDEQQQLFAMLYQRYAQHMKAYNA
LDFDDLILLPTLLLRHHEEVRTRWQTKIQYLLVDEYQDTNTSQYEMVKLLVGERARFTVV
GDDDQSIYSWRGAKPQNLVLLGKDFPKLKLIKLEQNYRSSQRILRAANILIANNPHVYDK
SLFSELAYGEPMRVLFAANEEQEAERVVAEIIRHKFVGRTQFGDYAILYRGNHQSRLLER
ALMTNRIPYKLSGGTSFFARAEIKDIMGYLKLVVNPDDDNAFLRVVNLPKRGIGPSTLER
LGNFANEKHISMFEAIFDPELNHHLPPNAMSALYQFGRFIVDTGEHAERGEPVEAVKQLI
RKINYEDYLYETSTSAKAAEMRMKNISELYRWVTEMLSGDELEDPMTLPEVVNRLTLRDM
MERNSEDEGGDQVQLMTLHASKGLEFPYVFMVGVEERILPHQTSIDEDNVDEERRLAYVG
ITRAQRELWFTLCRERRQFGETMRCEPSRFLHELPQDDLIWENRKPQQTEQERMQTGRSH
ISNLRDMFKKQ
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgaaactcaatcctgcccaaaatgatgctgttcattatgtttcgggtccctgcttagtg
ttagcgggcgcgggcagtggcaaaacacgcgtaattatcaacaaaattgcctacctagtg
caaaagtgtggctacaatgcgcgcaatatcgcggcggtaacctttaccaataaagccgcg
cgggagatgaaggagcgggtcgcacagtctatggggcgaaaagaggccagaggtttgtgg
atttcgaccttccacactctggggcttgagattgtaaaacgtgagcataaagtgttggga
ttaaagccaggtttctcgttattcgatgatcaagacacgctcgcgctcctcaaagagctg
actcaaaaagaattacaggaagataaggacctactcaaagccctcgcgggggcgatttcc
aactggaagggggggctgattattcccgaccaggcgcgcaagctggcaaaggatgaacag
caacagttgtttgccatgttgtatcagcgttatgcccagcatatgaaagcctacaacgct
ttggattttgatgacttaattctgctaccgaccctattgctaaggcatcacgaagaagtg
cgtacgcgctggcaaaccaagatccaatacctgctggtggacgaatatcaagataccaac
acttcccagtatgaaatggttaagttactggtgggcgagcgcgcgcgttttactgtggtg
ggggacgatgaccagtccatctattcatggcgcggggctaaaccgcagaacttagtgctg
ttgggcaaagattttcccaagcttaagctcattaaactcgaacaaaattatcgttctagc
cagcgaattttgcgggcggctaacatccttatcgccaacaatccccatgtgtatgataag
tcgttatttagcgaactggcttatggtgagccgatgcgggtgctgtttgccgccaatgag
gagcaagaagcagagcgtgtcgtcgccgaaattattcgccacaagtttgtcggtcgcacc
caatttggtgattacgcgattctgtatcggggtaaccaccagtctcgcctgcttgaacgg
gcattgatgactaaccgtatcccttacaagttaagcggcggcacctcgttttttgcccgt
gcagagattaaagacatcatgggctaccttaaattggtggtaaatcccgatgatgataac
gcctttttgcgggtggttaacttacctaaacggggtataggtccatccaccttggagcgt
ttgggtaactttgccaacgagaaacacatctctatgttcgaggcgatttttgatcctgag
ctgaatcatcatttaccgcctaatgccatgtcggccttgtatcaatttggtcgctttatt
gtcgatacgggtgagcacgccgaacgaggcgaaccggttgaagccgtaaaacagttgatc
cgtaagattaattacgaagactatttatacgagaccagtaccagtgctaaggccgccgag
atgcggatgaaaaacatctccgaactgtatcgctgggtgacggaaatgctctcgggggat
gagttagaagaccccatgaccttgccggaagtggttaaccgcctaacgcttagagatatg
atggagcgtaacagcgaagatgaaggcggcgatcaggtacagctaatgacgctgcatgcg
tctaaagggctggaattcccctatgtgtttatggtgggagttgaggagcgcattctgcca
catcaaaccagcatagatgaagataacgtcgacgaagagcgtcgcctggcgtatgtgggg
attacgcgcgcccagcgcgagttgtggtttactctttgccgtgagcgtcgccagtttggt
gagaccatgcgctgcgagccgagccgttttctgcatgagttaccgcaggatgatcttatt
tgggaaaaccgcaaaccgcagcaaacagagcaggagcgcatgcagactgggcgcagccat
atctcgaatttaagggatatgtttaaaaagcagtaa

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