KEGG   Shewanella decolorationis: D0436_02525
Entry
D0436_02525       CDS       T09167                                 
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
sdeo  Shewanella decolorationis
Pathway
sdeo00330  Arginine and proline metabolism
sdeo00480  Glutathione metabolism
sdeo01100  Metabolic pathways
sdeo01110  Biosynthesis of secondary metabolites
sdeo04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:sdeo00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    D0436_02525 (speF)
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    D0436_02525 (speF)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    D0436_02525 (speF)
Enzymes [BR:sdeo01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     D0436_02525 (speF)
SSDB
Motif
Pfam: OKR_DC_1 OKR_DC_1_C OKR_DC_1_N Beta_elim_lyase GKRP_SIS_2
Other DBs
NCBI-ProteinID: QDZ89418
UniProt: A0A5B8QSS1
LinkDB
Position
4634376..4636538
AA seq 720 aa
MKSLKVAASLSVRSCFEIDREVVNVLTTDFCDVGAAVVSVDDVKNGIVEKIKNTGLKLPI
FVSVCCEETFPDDICSSITGVFELCGSNTDFYGKQVETAVQKYEQALLPPFFGTLKKYVE
MGNSTFACPGHQGGQFFRKHPVGRQFFDFFGETIFRSDMCNADVKLGDLLIHEGAPLDAQ
KYAAKVFNADKTYFVLNGTSSSNKVATNALLAKGDLVLFDRNNHKSNHHGALIQAGATPI
YLETARNPFGFIGGIDAHCFQESYLREQIRAVAPERADEQRPFRLAIIQLGTYDGTIYNA
RQVVDRIGHLCDYILFDSAWVGYEQFIPMMNDCSPLLLELTPDDPGIIVTQSVHKQQAGF
SQTSQIHKKDKHIKGQARYCNHKRFNNAFMMHASTSPFYPLFAALDVNAKMHEGASGRYL
WREAVKAGIEARKLLLKKCKYIKPFIPSMIEGRPWQDYQTEQMADDLRFFEFEPGQKWHS
FDGYEKGQYFVDPCKFLLTTPGIDAETGKYTEFGIPATILANFLRENNIIPEKCDLNSIL
FLMTPAEDMAKMQHLVSQISRFEKLVDEDAPLSEVLPNVYNANKARYKDYTIRQLCQEMH
NLYVSHDVKQLQKEMFRQAHFPTKVMDPQEANLEFIRGNVELVPLSQIEGRIAAEGALPY
PPGVLCMVPGEIWGGAVQRYFLALEEGINLLPGFSPELQGVYLENTPDGKIQALGYVLNK
NT seq 2163 nt   +upstreamnt  +downstreamnt
atgaaatcattaaaagttgccgccagcttatctgttagatcatgttttgaaatagacaga
gaagtcgtcaatgtattaaccacagatttttgcgatgtgggcgcggctgtagtctctgtt
gatgatgttaaaaatggtattgttgagaaaatcaaaaataccggattaaaactgcctatt
ttcgtatccgtttgttgtgaagaaaccttcccagatgatatttgctcttctattactggg
gtatttgagctctgcggtagcaataccgatttctatggtaaacaggtcgaaaccgccgtc
caaaaatatgagcaagccctattaccgccgttctttggcaccctgaaaaaatacgtggaa
atgggcaactccaccttcgcctgtccgggccatcagggtggtcaattcttccgtaaacat
cctgtgggtcgccaatttttcgatttctttggcgaaaccattttccgctcagatatgtgt
aatgccgacgttaaactcggcgatctattaatccacgaaggcgcgccgctggatgcacaa
aaatacgcagctaaagtctttaacgccgataaaacctactttgtgctcaacggcacttct
tcttcaaacaaagtggcgaccaacgcactgctggcgaagggcgacctggtattattcgac
cgtaacaaccataaatccaaccaccatggcgcgttaattcaagccggtgcgacaccgatt
tatttggaaaccgcccgtaaccccttcggctttattggtggtatcgacgcccactgtttc
caagagtcttatttaagggagcagatccgcgccgtagcgcctgagcgtgccgatgaacaa
cgtccattccgtttagccattatccagctgggcacctacgacggcactatctacaatgct
cgccaagtcgttgatcgtattggtcatctatgtgattacatcctgtttgactcggcttgg
gtgggctatgaacagttcattcctatgatgaacgactgctcgccactgctgctggaactg
acacctgacgatcccggtattatcgtgactcagtcagtgcataaacagcaggctggtttc
tcacagacctcgcaaattcacaaaaaagataaacatatcaaaggccaagctagatactgc
aaccataaacgctttaacaacgcctttatgatgcatgcctctaccagccccttctatccg
ctgtttgccgcattggatgtgaacgctaaaatgcacgaaggcgccagcggccgttatcta
tggcgtgaagcggtcaaagccggtatcgaagctcgcaagttactgctgaaaaaatgtaaa
tatatcaagccatttatcccaagcatgatcgaaggacgcccatggcaggattatcaaact
gaacaaatggccgatgatttacgtttcttcgagtttgaacccggacaaaaatggcactcc
ttcgacggttatgaaaaaggccaatatttcgttgacccttgtaagttcctattaaccaca
cctggaatcgatgccgaaaccggtaaatatactgagtttggtattcccgcgactattttg
gctaacttcttacgtgaaaataatattattccagagaagtgcgacttaaattcgatttta
ttcctgatgacgccagcggaagatatggcaaagatgcaacacttagtgtcgcaaatatct
cgcttcgagaaattagtcgatgaagatgcgccattatcggaagtattgcctaacgtctat
aacgccaataaagcccgttataaagactataccattcgtcaactctgccaagaaatgcac
aacctttatgtcagccatgacgtaaaacaactgcaaaaagaaatgttccgtcaggcgcat
ttcccaaccaaagtgatggacccgcaggaggccaatcttgaatttatccgtggcaatgtt
gaattagtgccactgtcgcaaatcgaaggacggattgccgctgagggcgcactgccatat
ccacctggggtgttatgtatggtgccaggtgaaatatggggtggcgcagtacaacgttat
ttcctagcccttgaagaaggcatcaacttattacccggattctcccctgaattacaaggt
gtttacctcgaaaacaccccagacggaaaaatccaagccctaggttatgtattaaataaa
taa

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