Shewanella decolorationis: D0436_02625
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Entry
D0436_02625 CDS
T09167
Name
(GenBank) sodium:proton antiporter
KO
K18218
tetracycline resistance efflux pump
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdeo02000
]
D0436_02625
01504 Antimicrobial resistance genes [BR:
sdeo01504
]
D0436_02625
Transporters [BR:
sdeo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
D0436_02625
Antimicrobial resistance genes [BR:
sdeo01504
]
Gene variants
Tetracycline resistance genes
Transporters
D0436_02625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
Motif
Other DBs
NCBI-ProteinID:
QDZ89438
UniProt:
A0A5B8QST9
LinkDB
All DBs
Position
complement(4617990..4619495)
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AA seq
501 aa
AA seq
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MSPNLLAILPLLLTLVLALWLRRTLVALGVGILSGALIIAHFDIVQSLGYLLEIGAKQFY
CQGAWQWWHLNVLMAMLLLGSMTQLLARSGAVEQFGDWLYRRIRTGRQARIGVVLLGWLV
FIDGIFSCLAVGHVCQPLSQRYGIRQTQLAYLVDSNASPLCSLLPFSSWGPYVMALLAGL
SFLPVSALEAFIDVALFNFYAITTLGLSLIMAWFGMGFRSIDNTVLAAEPVEPSLTPSQG
NPWLLAIPMLTLLCASVGLTLWSGAQQVPSWDVSAWLAKADIGAAMRDACLLSTLVTLVL
LMLSGRSIGKLLADLVHGVRMIAFAIAILLCTWMIGAVIQDLGVASLLAAWAKLYLSPSL
LVAGMFLLCAIMAFATGSSWGTFAIMIPIGGEIAHNMDVSLLLPVLSAVMAGSVFGDHCS
PISDTSVLSATSSGCLPHDHVVTQLPFALIGAGAALVGFQLVNLSVATLFVWFGVIGTAL
GLLALMTRFYPPWLSARSQTS
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgaatctgcttgcgatacttcccctgttattaaccctagtgttagccctttgg
ctacggcgtaccttagtggcgctgggtgtcggtatcctctcgggcgccttaatcattgcc
cacttcgatatagtgcaaagcttgggctatctcttggagataggcgctaagcagttttac
tgccaaggcgcttggcagtggtggcatttaaatgtgttgatggccatgttgctgctgggc
agcatgacgcagctcctcgccagaagcggtgcggtagagcaatttggtgattggctatat
cgacgcattcgtacggggcgacaggcgcgtataggtgtggtgctgttgggctggctagtc
tttatcgacggtatttttagctgcctcgccgtggggcatgtgtgccaacctctgagccag
cgttatggtatccgtcagacgcagttggcctatttagtcgactctaatgcgtcgccactc
tgttcgctcttacctttttctagctggggtccctatgtgatggcgctgctggcgggactc
agctttttacccgtttctgcccttgaggcctttatcgatgtcgccttattcaatttttat
gcgataaccaccctaggcttgtcgctgattatggcttggtttgggatggggtttcgttct
atcgataatacggtattggcggcagagcccgttgagccaagtttaactccctcccaaggc
aatccttggttgcttgcgattcccatgctgaccttactgtgcgcctctgtcggtttaact
ctctggtctggcgcgcagcaggtgccgtcatgggatgtttcggcctggttagctaaagcc
gatattggcgccgcgatgcgcgatgcctgtctgttatcgaccttagtcacgctagtattg
ttgatgttgtcgggccgaagcataggaaaactgctggcggacttagtgcatggggtgcgg
atgattgcctttgccatcgcgattttactctgtacttggatgataggtgcggtgatccaa
gatctgggtgtggcgagcttgttagcggcttgggctaaattgtacttatccccgagtctg
ctggtggcggggatgtttctactctgcgctatcatggcctttgccacaggctcaagctgg
ggcacctttgcgattatgatccccatcggtggggaaattgcccataacatggatgtcagc
ttgctgttacctgtattgagtgcggtgatggcgggctcggtgtttggcgatcattgctcg
ccgatttccgatactagcgtgctgagtgcgacgagctctggctgcttaccccatgaccat
gtggtgactcaactgccatttgcgttaatcggagctggtgcggcattagtgggatttcag
ttagttaacttatcggttgcaaccctattcgtgtggtttggggttataggcactgcctta
gggttattggccttaatgacacgcttttatccaccttggctgagcgcacgttcgcagaca
agctga
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