Shewanella decolorationis: D0436_02665
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Entry
D0436_02665 CDS
T09167
Symbol
prpF
Name
(GenBank) 2-methylaconitate cis-trans isomerase PrpF
KO
K09788
2-methylaconitate isomerase [EC:5.3.3.-]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00640
Propanoate metabolism
sdeo01100
Metabolic pathways
sdeo01120
Microbial metabolism in diverse environments
sdeo01200
Carbon metabolism
Module
sdeo_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
D0436_02665 (prpF)
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Gene cluster
GFIT
Motif
Pfam:
PrpF
Motif
Other DBs
NCBI-ProteinID:
QDZ89445
UniProt:
A0A5B8QT73
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Position
4607688..4608899
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AA seq
403 aa
AA seq
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MSKNPFPPQIKVAATYMRGGTSKGVFFRLQDLPEAAQVPGPARDALLLRVIGSPDPYGKQ
IDGMGGATSSTSKTVILSKSTQADHDVDYLFGQVSIDKPFVDWSGNCGNLTAAVGAFAIS
NGLIDAERIPQNGICTVRIWQANIAKTIIVHVPITNGEVQETGDFELDGVTFPAAEVQIE
FMNPAADEDANANGGGGSMFPTGNLVDVLEVPGVGSFNATMINAGIPTIFINAEDLGYTG
TELQDDINGDNAALAKFETIRAHGAVRMGLIKHIDEAASRQHTPKVAFVAKPTSYVSSSG
KTVAAEEIDLLVRALSMGKLHHAMMGTAAVAIGTAAAIPGTLVNLAAGGGEKEAVRFGHP
SGTLRVGAQAMQANGEWTVVKAIMSRSARVLMEGFVRVPSDNI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaatccgtttccgccccagattaaagtagccgcaacttatatgcgcggcggt
accagcaaaggggtgtttttccgtttacaggacttacctgaggcggcccaagtacccggc
ccagctcgagatgccctgctgctgcgcgtgattggcagcccagatccctatggtaaacag
attgatggtatgggcggcgctacctcaagcaccagcaaaaccgtgattctgtctaaaagc
acccaagcagaccacgatgttgactatctgttcggccaagtgtctatcgataaacccttt
gtggattggagcggaaattgtggcaacttaaccgccgccgtcggcgcctttgccattagc
aatggcctgattgatgccgagcgcatcccgcaaaacggtatctgcactgtacgtatttgg
caggccaatatcgctaaaaccattattgtccacgtgcctatcaccaatggtgaagtgcag
gagaccggtgattttgagctcgatggcgtgaccttccccgccgccgaagtgcaaatcgaa
tttatgaatcccgccgccgatgaagacgccaatgctaacggcgggggtggtagcatgttc
cccacaggtaacttagtggatgtgctcgaagtaccgggcgttggcagctttaatgcaacc
atgattaatgcgggcatcccgaccatctttatcaatgccgaagacttaggctacacgggc
actgagctgcaagatgatattaatggcgataacgccgcccttgccaagtttgaaaccatt
cgcgcccatggcgcagtgcgtatggggctaatcaagcatattgatgaggccgcatcacgc
caacatacgcccaaagtggcctttgttgccaaacccaccagctatgtgtcatcgagtggt
aaaacggtcgcggcagaggaaatcgacctgctggttcgcgccctttccatggggaaatta
caccatgcgatgatgggcaccgctgcggtggctattggcacagcagcggcgattcccggc
actctagtcaacctcgccgccggcggtggtgaaaaagaagcagtgcgctttggccaccca
tcgggcaccttacgagtgggggcgcaggccatgcaagcaaacggagaatggactgtggtt
aaagccattatgagccgtagcgcccgcgtcctaatggaaggctttgttcgcgtaccgagc
gataatatctaa
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