Shewanella decolorationis: D0436_02945
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Entry
D0436_02945 CDS
T09167
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sdeo02044
]
D0436_02945
02035 Bacterial motility proteins [BR:
sdeo02035
]
D0436_02945
Secretion system [BR:
sdeo02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
D0436_02945
Bacterial motility proteins [BR:
sdeo02035
]
Pilus system
Pilus assembly proteins
D0436_02945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
Motif
Other DBs
NCBI-ProteinID:
QDZ89498
UniProt:
A0A5B8QT05
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All DBs
Position
4547583..4548854
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AA seq
423 aa
AA seq
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MATATTTKKPRSKKIEQKSQPKIYTFEWKGVNRDGQKTSGELRGASAAEIRSQLKSQGVN
PKTVRKQSAALFKLGDAKITPMDIAMVTRQVATMLAAGVPLVTTIELLGRGHEKAKMREL
LATILSEIQSGIPLSDALRPHRRYFDDLYVDLVAAGEHSGSLDVVFDRIATYREKSEALK
SKIKKAMFYPAAVVIVAILVTTLLLLFVVPQFEEIFKGFGAELPAFTQLVLHISRGLQSS
WYIFLGAIVAGVFLFVRAHRNSQIVRDRVDEVILKIPAIGPILHKGAMARFARTLATTFA
AGVPLIDGLESAAGASGNAVYRKAILKIRQEVMAGMQMNVAMRTTGLFPDMLIQMVMIGE
ESGSLDNMLNKVSTIYEMQVDDAVDGLSSLIEPIMMVVIGTVVGGLIVAMYLPIFQMGKV
VGG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggctacggcaacgacaacaaaaaagcctcggtctaaaaaaatcgagcaaaaaagccaa
cctaaaatttatacctttgaatggaaaggtgttaatcgcgacggtcagaaaaccagtggt
gagctgaggggggcttctgcggccgaaatccgcagtcagctcaaatctcaaggagtaaat
cctaaaaccgtacgcaaacaatcggccgccctgtttaaattaggcgatgccaaaatcact
cccatggatattgctatggtaactcggcaagttgctactatgcttgccgctggggtgcca
ttggtcaccacaattgaattactgggtcgcggccatgaaaaagcaaaaatgcgtgagctg
ctggcaacgattctttcagaaatccaatcgggtattccattgtccgatgctttgcgtcct
caccgacgttattttgatgatctttatgtcgatttagttgctgcgggtgaacattcaggc
tcactcgatgtagtgtttgatcgtattgcgacttaccgtgaaaagtctgaagcattaaaa
tcaaaaattaaaaaggccatgttttatccggcagcagtagttatagtcgcgattttagtc
acaaccctgcttttactctttgtagtgccacaatttgaagaaatttttaaaggctttggc
gccgagctgccagcatttacccaattggtgttgcatatctcccgcggtttacaatcctct
tggtatatctttttgggcgcaattgtggctggtgtgtttttatttgtccgcgcccaccga
aactctcagatagtgagggatagagtggatgaagtcattttaaaaattcctgctatcggg
ccaattttacataaaggcgctatggcacgttttgcccgcactttagcgaccacctttgca
gcgggtgtacccttaattgacggcttagaatccgccgcaggggcatcgggcaatgcggta
taccgtaaggctatcttaaaaatccgccaagaagtaatggccgggatgcaaatgaacgtg
gccatgcggaccacagggctgtttcccgatatgttgatccaaatggtgatgattggcgaa
gaatctggctcgctcgataatatgctcaataaggtttcaaccatctatgagatgcaagta
gacgacgctgtcgatggtttatccagcttaattgaacccattatgatggtggtgattggt
actgttgttggtggccttattgtcgctatgtatttacctatcttccaaatgggtaaagtg
gttggcggttag
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