Shewanella decolorationis: D0436_02970
Help
Entry
D0436_02970 CDS
T09167
Symbol
ampD
Name
(GenBank) 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
KO
K03806
N-acetyl-anhydromuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdeo01011
]
D0436_02970 (ampD)
Enzymes [BR:
sdeo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
D0436_02970 (ampD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sdeo01011
]
Peptidoglycan biosynthesis and degradation
Amidase
D0436_02970 (ampD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_2
Motif
Other DBs
NCBI-ProteinID:
QDZ89503
UniProt:
A0A5B8QSU1
LinkDB
All DBs
Position
complement(4541457..4542002)
Genome browser
AA seq
181 aa
AA seq
DB search
MGFDAGWFTSARRCESPHFNRRPFGEISLLVIHNISLPAGCFGLPYIDQLFQGCLDTSAD
DSFADLAGLQVSAHFLVRRDGECVQYVSCEDRAWHAGVSRYGERENCNDFSIGIELEGTD
TEPYTAAQYQQLIALTQALLAQYPALTAERIVGHCDIAPMRKTDPGPSFDWQRYLAALRD
F
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgatgccggatggtttacctcggcgcggcgctgtgaatcaccacattttaac
cgtcggccctttggagagatcagcctgttggtgatccacaatattagtttgcccgcggga
tgctttgggctgccttatattgatcaattatttcaagggtgtttagataccagtgccgat
gacagtttcgccgatttagctgggctgcaggtgtcagcacattttttagttcgccgcgat
ggcgaatgtgtgcagtatgtgagttgtgaagatagagcttggcacgcgggtgtatcccgt
tatggcgaaagggaaaattgtaatgatttctctattggtattgaacttgaaggtacggat
actgaaccctatactgccgcccaatatcagcaacttatcgcattgacccaagccttattg
gcgcaatatcctgcgttaaccgcagagcggattgtgggacactgcgatattgcaccaatg
cgtaagactgacccaggcccaagctttgactggcaaagatatttagcggcgctgcgcgac
ttttag
DBGET
integrated database retrieval system
