Shewanella decolorationis: D0436_03445
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Entry
D0436_03445 CDS
T09167
Name
(GenBank) HlyD family secretion protein
KO
K03543
membrane fusion protein, multidrug efflux system
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdeo02000
]
D0436_03445
Transporters [BR:
sdeo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
D0436_03445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
Biotin_lipoyl_2
HlyD_2
BshC
DASH_Spc19
Motif
Other DBs
NCBI-ProteinID:
QDZ89592
UniProt:
A0A5B8QUC5
LinkDB
All DBs
Position
complement(4427233..4428288)
Genome browser
AA seq
351 aa
AA seq
DB search
MSKSKLIIAVPLLLAAVAGGGYYWWTQVRFIETTDNAYVEADISHVSVKVPGYVVLSDVT
DNQHVRKGELLAQLEDNQFSAKVSQAEAALASAKADLQTLAAKVELQHALISQASAGVVA
AQADKLRAEQQLTRAKKLKVSNYSSQDDVDQLQAGFDSAAAGLDEAKALLVAKERELAVF
NAQLNQAGSVVEQSNAALELAKIQLNDTRVTAPFSGVIGKRGAMVGQYVQPGQALYSLVP
DGAVWITANFKETQIQHMQPGQSVQVSLDAFPDKTFTGVIDSLSPASGAKFSLLPAENAT
GNFTKIVQRIPVRIRLDLSEEEARVVPGLSAVVKVDTASHPTTAIAANVGR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagtaaactcatcatcgccgttccactattgctcgccgccgttgcgggtggc
ggttattactggtggacgcaggttcgttttatcgaaaccactgataacgcctatgttgag
gccgatatttcccatgtgagcgtaaaagtgccgggttatgtggtgttatccgatgtgacc
gataaccagcatgtgcgcaagggcgagttattggcgcaacttgaagataatcagtttagc
gctaaagtcagccaagccgaggcggcactcgccagtgctaaggccgatctgcaaacctta
gccgctaaggtggaattgcagcacgcgttgatcagccaagcgagtgcgggcgtggttgcg
gcgcaggccgacaaactccgtgccgagcaacagttaactcgtgctaaaaagttaaaagtc
agcaactacagctcacaggacgatgtcgaccaattacaagccggttttgattctgccgca
gcagggctagatgaagccaaggcactgttagtggctaaagagcgtgagctcgccgtattt
aatgcccagctgaatcaggctggttctgtggttgaacagtcgaatgcggcattggagctg
gctaaaattcagcttaatgatacccgcgtgaccgcgcctttctctggggtgattggtaaa
cgcggcgctatggtggggcaatatgtgcaacccggccaggcactctacagtttggttccg
gatggggctgtgtggatcacggcgaactttaaagaaacccaaatccaacatatgcaacct
ggacagtcggtgcaggtcagtctcgatgcgtttcccgacaaaacctttacaggtgttatc
gatagtctgtcaccggcgtccggagccaaatttagtctgctgcccgccgaaaatgccacg
ggtaacttcacgaaaatcgtgcaacgtatccctgtgcggatccgtttagatctctcagaa
gaagaggcgcgtgtcgtccccggtttaagtgccgtggtcaaggtcgatactgcgtcgcat
ccgacgacagccatcgctgctaacgtcggtcgctaa
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