KEGG   Shewanella decolorationis: D0436_03555
Entry
D0436_03555       CDS       T09167                                 
Symbol
rimK
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
  KO
K05844  ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
sdeo  Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:sdeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sdeo03009]
    D0436_03555 (rimK)
Ribosome biogenesis [BR:sdeo03009]
 Prokaryotic type
  ribosomal protein modification factors
   D0436_03555 (rimK)
SSDB
Motif
Pfam: RimK Rimk_N GSH-S_ATP ATP-grasp_3 ATPgrasp_ST Dala_Dala_lig_C R2K_3
Other DBs
NCBI-ProteinID: QDZ89614
UniProt: A0A5B8QSU8
LinkDB
Position
complement(4403107..4404012)
AA seq 301 aa
MKIGILSQFPELYSTRRLVAACEGRGHEAVVINTLNCYMNINSIKPSIHYQGQELTGFDA
VIPRIHASVTFYGCAVVRQFEMMGVFAANDSISIARSRDKLRALQLLSRKGIGMPITGFA
NKPNDIPDLINMVGGAPLVIKLLEGTQGIGVVLAETKTAAESVIEAFLGLKANIMVQEYI
KESNGSDIRCFVVGDKVVASMKRQGPEGDFRSNLHLGGSGEKVKITPAERKMAVAAVKAM
GLVVAGVDILRSNRGPLILEVNSAPGIEGIEQTTGISVTEPIVEYIEKMVSARKSNRAVI
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaaaataggtattttatcccagttcccagagttgtattccactcgacgtttagttgcg
gcctgtgagggtcgtggacatgaagccgtggttattaataccttgaattgctacatgaat
atcaactccatcaaaccgagcattcattatcaaggtcaagagctgactggtttcgatgcg
gttattcctcgtattcacgccagtgtgactttttacggttgtgctgttgtgcgccaattt
gaaatgatgggggtatttgccgctaacgattcgatttcaatcgcgcgctcgcgggataag
ttacgggcgctacaattactttcccgcaagggtattggcatgcctatcacagggtttgcg
aataaacctaatgatattcccgatttgattaacatggtgggtggcgcgcctttagtgatt
aagttactggaaggcacgcaggggattggcgtggtgttagccgaaacaaaaaccgctgcc
gagagtgtgattgaagcctttttagggctgaaagctaacatcatggtgcaggaatatatt
aaggaatccaacggcagcgatattcgctgttttgttgtgggtgacaaagtggttgcttcg
atgaagcgtcagggccccgaaggggattttcgttccaatttgcatttaggtggctctggg
gaaaaagttaaaattacgccagcagagcgcaaaatggcggtcgccgctgttaaagccatg
ggattggtggtcgcaggcgtcgatattttacgttctaatcgtggtccgttgatccttgaa
gtcaattcggctccagggattgaagggatagagcagaccacagggatttcggtcaccgaa
ccaattgtggaatatatcgagaagatggtatctgcgcgtaaatcgaatcgtgccgtgatt
gcctaa

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