Shewanella decolorationis: D0436_03765
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Entry
D0436_03765 CDS
T09167
Name
(GenBank) mechanosensitive ion channel
KO
K22051
miniconductance mechanosensitive channel
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdeo02000
]
D0436_03765
Transporters [BR:
sdeo02000
]
Other transporters
Pores ion channels [TC:
1
]
D0436_03765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MscS_porin
ABC_tran_Xtn
Motif
Other DBs
NCBI-ProteinID:
QDZ89656
UniProt:
A0A5B8QUR2
LinkDB
All DBs
Position
4356021..4359224
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AA seq
1067 aa
AA seq
DB search
MPRILLFVIAFLSFSLHANSPLQLDKRLGLNNQNQQQNISIDDQIAELKNNIDRLAANAS
SFQQAQLDFEKNKKIIDQGLKEAAKPLKLDKATDLNQQASMAYLRLSELKESETALGNQV
SELLQRHNLLPSVIANARQNVLQNKKTELAPIDTPAGELQQTQRVFFEQSLATNEAELAS
SQKRIELTQLQLQLVRQQLSQQEAFIETINKAMNKQRQQQTDATLAKNLVDTAKVVDPVT
RNIADTNQIYGQKLQTLTLQINNVVEQQEQAELQYQSQAKQLANIQEQITWVKMNSAFGE
RFLQMLQSLPKPPNHEKLQTLIADARLDRYHLEQQQALNEQELEQTNLYNEGQIKLLRSQ
QALLTQLMQSYDQYLSELGKLKVNYQQLSQQHLILKNTLNEHLFWVPNAASINKLWLTDV
QRSALWLVQEAQWGQLSKAWQEQNDYWSWWIILLVLCLVIQDLIKPKFNRLLGHYATYVG
NVTQDKFIYTFKSLVLSLGYALIKPLPIVAAGWIFYQSERNFVQAVGMGILAIGLVYLLY
RLIFILALDKGVLVGHFKRPSKLIQAGQLRLKHFVFIASPLLGIMGFTEILDASLIRNSI
GRGAFICFCVVLFLLYKDILVLSRQNSDTQKDGKNKRLIQKMLWALLISVPLLSAVLAFR
GYYFTAFQMLLQLQLSIILGLSFLLLYQLIKRWMLIERRRIAFDRAKAKRAERLALREKG
ETHHSSNDGLDTYEEPVVDLETISSQSLGLVRSLLLLAFLASLIGLWTQTHTALFSFLDG
ITLWTTNTSINGVEQQLPITMKSLLLGLIIVGFSLMIATNLPGLLELMILQRLDLTPGTG
FAITTVSRYLVVFLGLLIGFSNLGMEWSKLQWLIAALSLGLGFGLQEIFANFISGLIILF
EKPVRIGDTVTIRDLTGTVSKIQIRATTIIDWDRKEIIIPNKAFITEQLINWSLSDPITR
VIVHVSVARDSDPAKVEATLYQAVQECEDALPNPEPEVWFAGFGKHTQDYEVRAYAKDMS
ARWPLRHDLHKRITRKLKENNLELAYPQMEIHLKNGQTRDQVGIIRS
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtattttattgttcgttattgcttttttgtctttttctctccatgccaattcg
cccttgcaattggacaagcgccttggcctaaacaaccaaaatcagcaacaaaatattagc
attgacgatcaaattgcagagcttaaaaacaacatcgacagactggcggcgaatgcgagc
agttttcagcaggctcagctcgattttgaaaaaaacaaaaaaatcatcgaccaaggctta
aaggaagcagctaagcccttaaagctagataaagcgacagatctcaaccagcaagcctcg
atggcttatttacggctgtcggaattaaaagagagcgaaaccgccctcggtaatcaagtc
agcgaactgttacagcgccacaatctgctgccctctgtcatcgccaacgctaggcagaat
gtgctgcaaaataaaaaaacggaattggcgcctatcgatacgccagcgggtgaattacag
caaacgcaacgtgttttcttcgagcaaagcctcgctaccaatgaggccgagcttgccagt
agccaaaagcgcatcgaactcacccagctgcagttacagttggtgcgccaacaattaagt
caacaggaagcctttattgaaactatcaataaggcgatgaataaacagcgtcagcaacaa
accgatgcaaccttggcgaaaaatttagtcgataccgccaaggttgtggatccagtgacc
cgtaatatcgccgataccaatcagatctacggccaaaaactgcaaaccttaactttgcaa
atcaataacgtggttgagcagcaagaacaggccgagctgcaatatcaatcccaagccaag
caactcgcaaatatccaagagcaaatcacttgggtcaaaatgaactccgcctttggcgag
cgttttttgcagatgctgcaatctctgcctaagccgccaaaccatgagaagctgcaaacg
ctgatcgccgatgctcgcctcgatagatatcacctcgagcaacaacaggcacttaacgag
caagagttagagcaaaccaacctctacaacgaggggcagataaaactgctgcgctcacaa
caagcgctactaacgcagttgatgcagagttacgatcaatatttaagtgaactcggcaaa
cttaaagtaaattatcagcaacttagccagcaacatcttatattaaagaataccctcaac
gagcatctgttttgggtcccgaatgctgcgagcattaacaagctttggctcactgacgtt
caacgcagcgctttgtggttagtacaagaggcgcagtggggacaattgagtaaagcctgg
caggagcaaaatgactattggtcatggtggatcattctgttagtgctctgtttagtgatc
caagatttaataaaacctaaattcaatcggttactgggtcactatgccacttatgttggc
aacgtgactcaggataaatttatctacaccttcaaatccttagtcctgagccttggttat
gccctgatcaaaccgctccccatagtggcggcgggatggattttctatcaatccgaacgc
aactttgtgcaggccgtcggcatggggattttagcgataggattagtttacctattgtat
cgattgatatttatcctcgccctcgacaaaggggtcttggttggccactttaagcggccc
tcaaaactgattcaggcaggccagctcagacttaaacactttgtgtttatcgccagcccc
ctgctcggcattatgggttttaccgaaatactcgatgcctcacttatccgcaatagcatt
ggccgtggcgcatttatctgtttttgtgtggtgttattcttgttatacaaggatatcttg
gtgctaagccgccagaatagcgacacccagaaagacggcaaaaacaaacgccttatccaa
aaaatgctatgggcattgctgatttcagtcccactgctgagtgccgtactggcctttagg
ggttactacttcaccgccttccaaatgctgttgcagttgcaactctccatcatattggga
ttaagcttcctgctgctttatcaattgattaaacgttggatgttgattgagcgccgccgc
attgccttcgaccgcgcgaaagcgaaacgggctgagcgtttagcactgcgggaaaagggc
gagactcaccacagctcaaatgatggcctcgatacctacgaagagcccgtagtcgatctt
gaaaccatttcgagtcaatccctcggcctggtgcgctccctattgctattggcgttttta
gccagcttgattggcctgtggacgcaaacccatacggcgctattttcctttttggatggc
atcaccctctggacgacaaataccagcatcaatggtgtcgagcaacagctccccattacc
atgaaatcgctgttattgggcttaatcattgttggcttctcgctgatgatcgccaccaat
ttacccggtctgctcgaactgatgatcttacaacggctcgatttaacacccggcaccggc
tttgccatcaccacagtaagccgttatttagtggtgtttttaggcctgctgattggcttt
tcgaatctcgggatggaatggtcaaaactacaatggttgattgcagctttgtcactgggt
ctaggttttggtttgcaggagatttttgccaactttatctcgggcctgattattctgttc
gaaaaaccagtgcgtattggcgatacagtgacaatccgcgacttaacaggaacagtgagt
aaaatccagatccgtgccaccaccattatcgactgggacagaaaggaaattatcattcct
aacaaggcctttattaccgagcaattgattaactggtcactgtcggaccccatcacgcgg
gtgatagtgcatgtgtcggttgcccgcgattcggatccggcgaaagtcgaggcaactctg
tatcaagcggtgcaggaatgcgaagatgcgctgcctaatccagagccagaagtgtggttt
gcgggctttggtaaacatacccaagactatgaagtacgggcctacgccaaagatatgtcg
gcacgctggccgctacgccacgatctgcataaacgcattacccgtaagcttaaagaaaac
aatttagaactcgcctatccgcaaatggaaatccatcttaaaaatggccaaactcgcgat
caggtcggcattatccgcagttaa
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integrated database retrieval system
