KEGG   Shewanella decolorationis: D0436_04035
Entry
D0436_04035       CDS       T09167                                 
Symbol
traC
Name
(GenBank) type IV secretion system protein TraC
  KO
K12063  conjugal transfer ATP-binding protein TraC
Organism
sdeo  Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:sdeo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sdeo02044]
    D0436_04035 (traC)
Secretion system [BR:sdeo02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   D0436_04035 (traC)
SSDB
Motif
Pfam: TraC_F_IV P-loop_TraG AAA_10 DUF5934 DUF87 AAA_22 HNOB nSTAND3 T4SS-DNA_transf
Other DBs
NCBI-ProteinID: QDZ89705
UniProt: A0A5B8QTR6
LinkDB
Position
complement(4304940..4307342)
AA seq 800 aa
MKASLYSGQRASELLPVLAYSDDEQLFFMEDQSVGFGFLCDPLPGGDESVADRVNVLLNN
DWPKDTLLQFGLYASPDIQTDLQRMMGLRHRQSDPLLRASIRKRADFLDGGTVQPIEEST
QTQVRNFQLIVTCKLPLESSIPTERELSRASALRASFSQALATVGFRVTEMTDRNWLAAL
SAQLNWGKDASWRNPSPIRSEADKPLREQVLDYDRAIKVDSQGLMLGDYRVKTLSFKRLP
ERIWFGHAASFAGDMMTGSRGLRGSFLLNVTIHFPSAEAMRSRLETKRQWAVNQAYGPML
KFVPVLAAKKKGFDVLFEALQEGDRPIRANMTLTLFSPTEEASISSVSNARTYFKELGFE
LMEDKYFCLPIFLNALPFGADRQAMNDLFRFKTMATRHVIPLLPLFADWKGTGTPVINFV
SRNGQIMSVSLYDSGSNYNCCIAAQSGSGKSFLVNEIISSYLSEGGQCWVIDVGRSYEKL
CEVYDGEFLQFGRDSGICLNPFEIVEDYDEEADVLVGLLAAMAAPTQSLTDFQMANLKRQ
TRELWEKKGRAMLVDDVAEALKNHEDRRVQDVGEQLYPFTTQGEYGRFFNGHNNIRFKNR
FTVLELEELKGRKHLQQVVLLQLIYQIQQEMYLGERDRRKIVFIDEAWDLLTQGDVGKFI
ETGYRRFRKYGGSAVTVTQSVNDLYDSPTGKAIAENSANMYLLGQKAETINALKKEGRLP
LGEGGYEYLKTVHTVTGVYSEIFFITEMGTGIGRLIVDPFHKLLYSSRAEDVNAIKQLTR
KGLSVADAISQLLKERGFDE
NT seq 2403 nt   +upstreamnt  +downstreamnt
atgaaagcctctctgtattcagggcaacgcgcttcagagctcttgccagtattggcctat
tcagacgatgagcaactgtttttcatggaagaccagagtgttggctttggttttctatgt
gacccattgccgggtggtgatgagtctgttgcagacagggttaatgttctactcaacaac
gactggccaaaagacactttgctgcaatttggcctgtacgcctcgcctgatattcaaacc
gaccttcagcgcatgatgggcttacggcatcgtcaatccgatccattgctcagggcgtcg
attcgcaaacgtgcggatttcctcgatgggggcacggttcaaccgatagaagaatcgacc
cagactcaggtacgcaactttcaactgatagtcacctgcaaattgcctttggaaagttct
ataccgacggagcgtgagttgagtcgagcatccgcgcttcgggcttctttctcgcaagcg
ctggcaacggttggttttcgcgtcactgagatgactgaccgaaattggctcgcagcatta
agtgcgcagcttaactggggaaaagatgcttcctggcgcaatccatcaccaatccgcagt
gaggctgataaaccacttcgagagcaagtgttggattatgaccgagctatcaaggtggat
agccaaggtctgatgttgggtgattaccgagttaaaaccctatcgtttaagcgcctgcct
gagcggatctggtttggccatgccgcaagttttgcgggcgatatgatgacgggcagtcgc
ggtttacgcgggagctttttgctgaatgtcaccattcactttccttcagccgaggccatg
cgatctcgtttagagacgaagcgtcaatgggcggtcaatcaggcttatggcccgatgctc
aagtttgtgccggtgctggcagccaagaaaaaggggtttgatgttctttttgaagccttg
caagaaggtgatcgtcctattcgggcaaatatgaccttaacgctgttttcaccaacagaa
gaggcgtccatcagctctgtttcaaatgctcgaacttatttcaaagaactcgggtttgag
ctgatggaagacaagtacttctgtttgcccattttcctgaatgccttgccatttggtgct
gaccgccaggcgatgaacgacttgtttcgattcaagaccatggcgacacggcatgtgatc
cctctgttgcctttgtttgcggattggaaaggcactggcacgccagtgattaactttgtt
tcccgtaatggccagatcatgagtgtgtccctttatgactcgggcagtaattacaactgt
tgcatagcggcgcaatcagggtcgggtaagtcattcctggtgaacgaaatcatatcctcc
tacttatcagaaggcgggcaatgctgggtgattgatgttggccgctcctatgaaaagctg
tgtgaagtctatgatggtgagttcttacagttcgggcgggacagtggcatttgcttaaat
ccgtttgaaatcgttgaggactatgacgaagaagcggatgtactggttggactattggcc
gcaatggccgcgcctacgcagtcattaactgattttcagatggccaacctaaagcgtcag
acccgtgaactgtgggagaaaaaaggtcgtgccatgttagttgatgatgtggcagaggct
ttaaaaaatcatgaagaccgacgtgtgcaggacgtgggtgagcagctctatccgtttacg
acacagggcgaatatggccgcttctttaatggccacaacaatattcgcttcaaaaaccgt
ttcaccgttttggagttagaagagctcaaggggcgcaagcacctgcaacaagtggtgttg
cttcagcttatctaccaaatccaacaagagatgtacttaggtgagcgggatcgtcgcaag
attgtgttcattgacgaagcctgggatctgctgactcaaggtgatgtcggtaagttcatc
gagacgggttaccggcgatttcgaaaatatggtggcagtgctgtaacggtaacgcagtcg
gtcaacgatttgtacgacagcccaacaggtaaagccatcgctgaaaactcggccaatatg
tacctgcttggccaaaaagctgaaaccatcaacgcgctcaaaaaagaaggccgcttgcca
ctaggtgaaggcggctatgaatacctgaaaacggttcataccgtcactggtgtctattcc
gaaattttctttattaccgagatgggcaccgggattggccgcctcatcgtcgatccgttt
cacaagctgttgtactcgtcccgtgcagaagatgtaaacgcgattaaacagttaacgcgc
aaaggcctttctgttgctgatgccatctctcagttgttgaaggagcgaggctttgatgaa
taa

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