Shewanella decolorationis: D0436_04325
Help
Entry
D0436_04325 CDS
T09167
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00550
Peptidoglycan biosynthesis
sdeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D0436_04325 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sdeo01003
]
D0436_04325 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdeo01011
]
D0436_04325 (mrcB)
Enzymes [BR:
sdeo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
D0436_04325 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
D0436_04325 (mrcB)
Glycosyltransferases [BR:
sdeo01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
D0436_04325 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
sdeo01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
D0436_04325 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
Motif
Other DBs
NCBI-ProteinID:
QDZ89760
UniProt:
A0A5B8QSZ5
LinkDB
All DBs
Position
complement(4233270..4235564)
Genome browser
AA seq
764 aa
AA seq
DB search
MTTKTTKKAKAQRSRGLFGHIWSLTWKLALIGLAVVTFYGIYLDQIIARKFEGQKWHLPA
QVFSRSMALYPGAAVSHPQLMAELKLLGYRKVANPREVGEFSASSTKIELWRRPFLHPEG
DQPEQRVMITFDSEGVSSIARMEDKRQLAVFHLEPVLLDRMITGDGEDRLFVSTEDMPKH
IVQALLLVEDRSFYEHHGVNPFAILRAAFVNISAGRTVQGGSTLTQQLAKNFFLSSERSL
LRKVREALMAVIIDFRYSKEEILEAYLNEVYMGQDKSRAVHGMGLASQFYFGRPIGELTT
AQQAFLVAAIKGPSYYNPWRYPERSQERRDLVLRLLMESGELTTAQYKVAVESPLGLRNA
NKPVHQKLPAFYALVKQELNERYGDALLKQSGVKIYTTLDPMAQEAAEIAVTQTFKSLDK
GNKSLQIGMVVTDKYTGGIAAMVGDKTPGFDGYNRAVEIRRPIGSLIKPFVYATALAPNS
KFTLATPLKDQPITLKNEQGKTWSPQNFDKKFSGQVSLLTALKKSMNVPTVNLGIAVGVD
AVATTLAKSGWEEPLNEYPSMLLGAVNGSPLMVAQVYQTLADSGAYRKLTTVTAVLDSEN
QPLPVTRSAKEQAITPDTDFLVQYAMQQVVRSGTATRLGNAFPGVALAGKTGTSNDSRDS
WFAGFDERNVAAIWVGRDDNGKTSLYGSSGAMAVYQAFLKERPPIGLRSIPPSGVIQGYF
DRDTGEAKEAGCSNTEALPALRGTYNPAKNCGEPLQWWQKILGQ
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgacaactaagacgacaaaaaaagcgaaagcgcagcgcagccgtggcctgtttgggcac
atttggtcgctcacttggaagctcgccttaatcggcctcgccgttgtgaccttctacggt
atttacctcgaccaaattatcgcccgtaagtttgaggggcaaaaatggcacttacccgca
caagtatttagccgctccatggcgttatacccaggagctgccgtgagtcatccgcagttg
atggccgagttaaagctacttggttatcgcaaagtcgccaatccccgcgaggtaggtgag
ttctctgcatccagcaccaaaatcgaattatggcgccgtccctttttgcatcctgaaggt
gatcagcctgagcagcgagtgatgatcaccttcgatagcgaaggtgtcagctctattgcg
cgcatggaagataaacgccagttagcggtattccatttagaacctgtattgctcgaccgc
atgatcaccggtgacggcgaagataggctctttgtctctaccgaagatatgcccaaacat
attgtgcaggcgctattgctggtggaagaccgcagtttttacgagcatcatggggtcaat
ccattcgcgattctgcgcgcggcttttgtgaatatcagcgcgggtcgtaccgtacagggc
ggctcgacactgacccagcagttggcgaaaaactttttcctttcgagcgagcgctcgttg
ctgcgtaaagttcgcgaagccttaatggcggtaattatcgattttcgctacagcaaggaa
gaaattctcgaagcttaccttaacgaagtgtatatggggcaagataaatcccgcgccgtg
catgggatggggctggcttcacagttctattttggccgtcccattggcgagttaaccacg
gcgcagcaagcgtttttagtggcagcgattaagggaccgtcttactacaacccatggcgt
tatcctgagcgcagccaagagcgtcgcgatttagtgctgcgtctcttgatggagtcgggt
gagctgacgactgcacaatacaaggtggcggtggagtcgcccttgggtttacgtaatgcc
aataagcctgtgcatcaaaaattacctgcgttttatgccttggttaaacaagagcttaac
gagcgctacggcgatgcgttattaaaacaatctggggtgaagatttacaccacactcgat
cctatggcgcaggaagccgccgaaatcgccgtgactcaaacctttaagagcttagataag
ggcaataagtcgttgcagataggtatggtggtcaccgacaaatacactggcggtatcgcg
gccatggtcggtgataaaacgccgggctttgacggctataaccgcgcagtggagatccgc
agacctattggctcgcttatcaagccatttgtgtacgccaccgctttggcaccaaatagt
aaatttactttggccacgccacttaaagatcagccgattaccctaaagaatgagcaaggc
aaaacctggtcaccgcagaactttgataagaagtttagcggccaagtttccttgttaacg
gcgctgaaaaaatcgatgaacgtgccgacggtcaacctcgggattgccgttggagtcgat
gcggtggcaaccacgctggccaaatcgggttgggaagaaccgcttaacgagtacccgtcg
atgctactgggcgcggtgaatggctcacccttaatggtggcgcaggtttatcaaaccctc
gccgatagcggcgcttatcgtaaactcaccacagtcaccgctgtgctcgatagtgaaaat
cagcctttgcccgtaacgcgttcagccaaggagcaagcgattacgccggatactgacttt
ttggtgcaatatgccatgcagcaagtggtgcgctcgggtacagcaacgcgcttaggcaat
gccttccctggtgtggcgctggcgggtaaaactggtaccagtaacgatagccgcgattct
tggttcgccggttttgatgagcgtaacgtggcggcgatttgggtcggtcgcgacgataac
ggtaaaaccagtctttatggcagcagcggggcgatggcagtataccaagccttcttgaag
gagcgaccacccattgggctgcgttcgattccgccatcgggtgtgatccaaggctatttt
gaccgagatacgggcgaagccaaggaagcgggatgcagtaatactgaggcattaccggcc
ttgagaggcacttataatccagctaaaaactgcggcgagccgttgcagtggtggcagaag
attttaggtcagtaa
DBGET
integrated database retrieval system
