Shewanella decolorationis: D0436_05090
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Entry
D0436_05090 CDS
T09167
Symbol
tcdA
Name
(GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdeo03016
]
D0436_05090 (tcdA)
Transfer RNA biogenesis [BR:
sdeo03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
D0436_05090 (tcdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
Pyr_redox_2
DAO
3HCDH_N
NAD_binding_7
UDPG_MGDP_dh_N
Spermine_synth
AlaDh_PNT_C
ELFV_dehydrog
Shikimate_DH
AdoHcyase_NAD
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
QDZ89899
UniProt:
A0A5B8QUU3
LinkDB
All DBs
Position
969156..969959
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AA seq
267 aa
AA seq
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MTEAYQNRFGGIGRLYGQKALAKFAASHVVVIGIGGVGTWAAEALARSGIGQITLIDLDD
ICVTNTNRQIHALTATIGESKVAVMAQRIRAINPDCQVNEVEDFITVDNLGEYLLGAKAG
GNIDYVVDCIDAVKQKAALIAWCKRQKIKIVTVGGAGGQTDPTQIQLTDLAKTYQDPLLA
KVRNILRREYNFSKNVQRRFAVDAVFSSEQLVYPQADGSVCSSKAGADGSMRMDCASGFG
AVTMVTGTFGFVAASRVLARLAQLANE
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagcctatcaaaatcgctttggtggcattggccgcctatacgggcaaaaggcg
ctcgctaaatttgccgcctcccatgtggtggtgattggcatcggtggcgttggtacttgg
gctgctgaggctttggcgcgcagtggtattggccaaattaccctgattgatttggatgat
atctgtgtaaccaacacgaaccgtcaaattcatgctctgacagcgacgatcggcgaatct
aaagtggcagtgatggcgcagcggatccgcgcaattaatcccgattgccaagtgaatgaa
gtggaagattttattactgtcgataacctcggtgagtatttgctcggagcaaaggctggg
ggcaatattgattatgtggttgattgtattgatgcggttaagcaaaaagctgcgttaatt
gcttggtgtaaacgccaaaaaattaaaatagtgacggttggtggtgcgggcggtcaaacc
gatcctacgcaaattcagctcaccgatctggcaaaaacctatcaagatcctttgctggcc
aaagtgcgtaatattttgcgccgcgaatataacttctcaaaaaatgtgcagcgtcgtttt
gcggtagatgcagtgttttccagcgaacaattagtttatccccaggccgatggttccgtg
tgtagcagcaaggctggcgcagatggctcgatgcgtatggattgtgcgtctggctttggg
gctgtgactatggtgacgggcacttttggatttgtggccgcaagtcgtgtgctcgcaaga
ctggcgcaactggcaaacgaataa
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