Shewanella decolorationis: D0436_05460
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Entry
D0436_05460 CDS
T09167
Symbol
asnC
Name
(GenBank) transcriptional regulator AsnC
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdeo03000
]
D0436_05460 (asnC)
Transcription factors [BR:
sdeo03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
D0436_05460 (asnC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_AsnC-type
HTH_24
NirdL-like_HTH
HTH_11
HTH_20
MarR_2
HTH_IclR
HTH_5
MarR
HTH_Tnp_4
HTH_34
B-block_TFIIIC
DUF4080
HTH_Crp_2
Mga
Sigma70_r4
Clp_N
AsnC_trans_reg_3
HemN_C
Motif
Other DBs
NCBI-ProteinID:
QDZ89970
UniProt:
A0A5B8QTJ5
LinkDB
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Position
complement(1050694..1051155)
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AA seq
153 aa
AA seq
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METAFQRDQLDNHILEALMQDARTPFAELAKRFGVSAGTIHVRVEKMKQAGIITGAQITI
NPKALGYDVCCFIGINLKSAGDYPAAIAKLNALEEVVEAYYTTGNYSIFVKVMCQSIDGL
QHVLINRIQSIDEIQSTETLISLQNPITRAVKP
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccgcatttcagcgtgatcagctagataaccatatcctcgaagccttaatgcaa
gacgcgcgcaccccctttgccgagcttgccaaacgtttcggcgtgagtgcgggtactatc
catgtgcgtgttgagaaaatgaaacaagcggggattatcaccggtgcccaaatcaccatc
aatcccaaggctctcgggtacgatgtctgctgttttattggaattaatctcaaaagtgct
ggcgactaccccgccgccatcgccaagctaaacgccctcgaagaagtggtagaagcctac
tacaccacaggcaactacagtatttttgtcaaagtcatgtgccaatccattgatggcctt
caacacgtgctaattaaccgcatccaatccatcgacgaaattcaatcgactgaaacccta
atcagcctgcaaaacccgattacgcgggcggtaaagccttaa
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integrated database retrieval system