Shewanella decolorationis: D0436_05840
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Entry
D0436_05840 CDS
T09167
Name
(GenBank) sugar-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo02010
ABC transporters
sdeo02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D0436_05840
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
D0436_05840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdeo02000
]
D0436_05840
Transporters [BR:
sdeo02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
D0436_05840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
B12-binding
APP1_cat
DUF5615
PucR
Motif
Other DBs
NCBI-ProteinID:
QDZ90039
UniProt:
A0A5B8QVC5
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All DBs
Position
1142778..1143788
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AA seq
336 aa
AA seq
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MARLFMLLIALSLLPLSSSDGKELKFAVVPKFYSVFFDQSKTGCVDAAAQIKGVECIYLG
PELSSVRLQDQVINQLIDEGVDGIAVAVTQSKYLIENSLKRAKEAGIPVVTYDSDFDASI
NQDPKNFRLAYIGTDNFELGKSLGEELKKLRPNGGTLIIQSGRPDSPNLNLRLMGVRSAL
SGTTYSVPPGKMLNNEQGWTEVREPLFNFDQLSQAVKQMESVMKGKPVKADSFVSVGGWA
QNDAALYREMMAPYQDKIDNKDIVIIITDTSPEQLAMLKDRLAHINIGQSPYEMGRQAIL
TLYKIVTKQKYDDIIYTPVTFCTQQNYETCEKPAGM
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcaagattgtttatgctgcttattgcgttgagtctattaccactgtcttctagtgat
gggaaagagcttaaatttgcagttgttcccaaattttatagtgttttctttgaccaaagt
aaaaccggttgtgttgacgccgctgcacaaataaaaggggttgagtgtatctacctagga
cccgaattaagtagtgtgagattgcaagatcaagtgataaatcagcttattgacgaaggt
gttgatggtattgccgttgcggttacccaatctaagtatttaattgaaaatagccttaaa
agagcaaaggaagccggcatacccgttgttacctatgattctgactttgatgcttctatt
aaccaagatcccaagaattttcgcttagcctatatcggtactgacaattttgaactgggt
aaatcattaggggaggaattaaaaaaattacggcctaatggagggacgttaatcatacaa
tctgggcgaccagattcccccaatttgaatttaagactgatgggcgttcgctccgcatta
tctgggactacatacagtgttcctcccgggaaaatgctaaataacgaacagggctggact
gaagtgcgggagcctttgtttaattttgaccaacttagtcaagcggttaagcaaatggag
tccgtgatgaaaggtaagccagtgaaggccgactcctttgtttccgttggtggttgggca
caaaatgatgcagccctctaccgtgaaatgatggcaccctatcaagataaaatcgataac
aaggacatcgtcattattattaccgacacttctccagaacaattagctatgttgaaagac
cgccttgcccatatcaacattggtcaaagtccctatgaaatgggaaggcaggccattttg
accttatataaaattgtcaccaaacaaaaatacgacgacattatctacacacctgtgacc
ttttgtactcaacagaactatgagacctgcgagaaacctgcgggaatgtaa
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