KEGG   Shewanella decolorationis: D0436_05840
Entry
D0436_05840       CDS       T09167                                 
Name
(GenBank) sugar-binding protein
  KO
K10439  ribose transport system substrate-binding protein
Organism
sdeo  Shewanella decolorationis
Pathway
sdeo02010  ABC transporters
sdeo02030  Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:sdeo00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    D0436_05840
 09140 Cellular Processes
  09142 Cell motility
   02030 Bacterial chemotaxis
    D0436_05840
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sdeo02000]
    D0436_05840
Transporters [BR:sdeo02000]
 ABC transporters, prokaryotic type
  Saccharide, polyol, and lipid transporters
   Ribose transporter
    D0436_05840
SSDB
Motif
Pfam: Peripla_BP_4 B12-binding APP1_cat DUF5615 PucR
Other DBs
NCBI-ProteinID: QDZ90039
UniProt: A0A5B8QVC5
LinkDB
Position
1142778..1143788
AA seq 336 aa
MARLFMLLIALSLLPLSSSDGKELKFAVVPKFYSVFFDQSKTGCVDAAAQIKGVECIYLG
PELSSVRLQDQVINQLIDEGVDGIAVAVTQSKYLIENSLKRAKEAGIPVVTYDSDFDASI
NQDPKNFRLAYIGTDNFELGKSLGEELKKLRPNGGTLIIQSGRPDSPNLNLRLMGVRSAL
SGTTYSVPPGKMLNNEQGWTEVREPLFNFDQLSQAVKQMESVMKGKPVKADSFVSVGGWA
QNDAALYREMMAPYQDKIDNKDIVIIITDTSPEQLAMLKDRLAHINIGQSPYEMGRQAIL
TLYKIVTKQKYDDIIYTPVTFCTQQNYETCEKPAGM
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggcaagattgtttatgctgcttattgcgttgagtctattaccactgtcttctagtgat
gggaaagagcttaaatttgcagttgttcccaaattttatagtgttttctttgaccaaagt
aaaaccggttgtgttgacgccgctgcacaaataaaaggggttgagtgtatctacctagga
cccgaattaagtagtgtgagattgcaagatcaagtgataaatcagcttattgacgaaggt
gttgatggtattgccgttgcggttacccaatctaagtatttaattgaaaatagccttaaa
agagcaaaggaagccggcatacccgttgttacctatgattctgactttgatgcttctatt
aaccaagatcccaagaattttcgcttagcctatatcggtactgacaattttgaactgggt
aaatcattaggggaggaattaaaaaaattacggcctaatggagggacgttaatcatacaa
tctgggcgaccagattcccccaatttgaatttaagactgatgggcgttcgctccgcatta
tctgggactacatacagtgttcctcccgggaaaatgctaaataacgaacagggctggact
gaagtgcgggagcctttgtttaattttgaccaacttagtcaagcggttaagcaaatggag
tccgtgatgaaaggtaagccagtgaaggccgactcctttgtttccgttggtggttgggca
caaaatgatgcagccctctaccgtgaaatgatggcaccctatcaagataaaatcgataac
aaggacatcgtcattattattaccgacacttctccagaacaattagctatgttgaaagac
cgccttgcccatatcaacattggtcaaagtccctatgaaatgggaaggcaggccattttg
accttatataaaattgtcaccaaacaaaaatacgacgacattatctacacacctgtgacc
ttttgtactcaacagaactatgagacctgcgagaaacctgcgggaatgtaa

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