Shewanella decolorationis: D0436_06035
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Entry
D0436_06035 CDS
T09167
Name
(GenBank) 23S rRNA pseudouridine(2604) synthase RluF
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdeo03009
]
D0436_06035
Enzymes [BR:
sdeo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
D0436_06035
Ribosome biogenesis [BR:
sdeo03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
D0436_06035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QDZ90072
UniProt:
A0A5B8QVH6
LinkDB
All DBs
Position
complement(1191299..1192009)
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AA seq
236 aa
AA seq
DB search
MRLAKYLAQCGISSRREACRLIEARRISLNGKIAKHTDAVHFDADGHCLDSLCLDEKPIS
GTEALTYWIFNKAVGTDCRLLDADKSSLLHLLPTTPRLYPVGRLDKDSRGLLLLTNDGEL
THKLMHPSFAHSKTYHVQLDKPFNDAFIEQMASGVQYKEVRTLPCQVTRLSADRFEIVLT
QGLNRQIRRMSNALGYKVIDLQRVALMTLTLGSLAEGEMRSISPEEVTALKAAVTI
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttgccaaataccttgcccaatgcggcattagttcacgccgtgaggcctgccgc
ttgattgaggccagacgcatcagcctcaatggcaagatagccaagcataccgatgccgtg
catttcgatgctgacggtcactgtcttgatagcctctgcttagatgaaaagcccatatcg
ggcaccgaagcgcttacttattggatcttcaataaagccgtaggcacagattgccgtttg
ttagacgccgataaatccagtttgctgcatttactaccaaccacaccaagactctaccct
gtgggcagattagacaaggattcccgcggtttattactgctgactaacgatggcgaactc
acccataaactgatgcaccccagttttgcccacagtaaaacctatcacgtacaactcgat
aagcccttcaacgatgcctttatcgagcaaatggccagcggcgtgcaatacaaagaagta
cgcacactcccctgccaagtcacacggttaagtgcagaccgttttgaaattgtgctgacc
caagggttgaatcgccaaattcggcgcatgtccaacgccttaggctataaggtgattgac
ttgcaacgcgtcgcgttaatgacattaaccctaggatccttagccgaaggcgaaatgcga
tcaatcagcccagaggaagtgacagcacttaaagccgcagtgacgatttaa
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