Shewanella decolorationis: D0436_06305
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Entry
D0436_06305 CDS
T09167
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00220
Arginine biosynthesis
sdeo00240
Pyrimidine metabolism
sdeo00250
Alanine, aspartate and glutamate metabolism
sdeo01100
Metabolic pathways
sdeo01110
Biosynthesis of secondary metabolites
sdeo01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
D0436_06305 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
D0436_06305 (carB)
00220 Arginine biosynthesis
D0436_06305 (carB)
Enzymes [BR:
sdeo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
D0436_06305 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
Dala_Dala_lig_C
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QDZ90121
UniProt:
A0A5B8QW16
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All DBs
Position
1256523..1259747
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AA seq
1074 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIQWEVVRNIIAKERPDAILPTMGGQTALNCALELEAKGVLAEFNVEMIGATA
DAIDKAEDRSRFDKAMKSIGLECPRAGIAHSMEEAYGVLDLVGFPCIIRPSFTMGGSGGG
IAYNKEEFEEICSQGLDLSPTKELLIDESLIGWKEYEMEVVRDRNDNCIIVCSIENFDPM
GVHTGDSITVAPAQTLTDKEYQLMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDITGGRTPASFEPAIDYVVTKVP
RFNFEKFAGSNDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVSRHGFDPITDLTKADA
LARIRLELKEPGCDRIWYIADAMRAGLTLDEIFRLTNIDPWFLVQIEELIKLEGQVAEGG
LAGLNEELLRKLKRKGFADARLAAVLGVNETEVRKLRDRFDIHPVYKRVDTCAAEFATDT
AYMYSTYEEECEANPSDREKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPI
IGTSPDAIDRAEDRERFQQAIQRLEMKQPENDTVTTVEGAVIAAERIGYPLVVRPSYVLG
GRAMEIVYDQQDLLRYFNEAVSVSNASPVLLDHFLDDAIEVDIDAVCDGETVVIGAIMEH
IEQAGVHSGDSGCSLPPYTLSQAIQDEMRVQVRKLAMELGVVGLMNVQFAVKNNEIYMIE
VNPRAARTVPFVSKATGVPLAKIAARVMAGQSLKAQNFTQEVIPPFYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGDTFAEAYAKAQLGATSEVPKSGRALLSVRNSDKKRVADLA
AKLIELGYQIDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNGEYTYIVNTTEGRQ
AIEDSRQLRRGALRYKVNYTTTMNAAFATCMAHAADDRTNVTSVQELHQRVLAK
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagatataaaaagtattcttatcctaggtgcaggcccaattgttatt
ggtcaggcgtgtgaattcgactattcaggcgctcaagcctgtaaagccctgcgtgaagaa
ggttaccgcgtcattctggtgaactctaaccctgccaccattatgaccgaccctgaaatg
gccgatgctacttacatcgagccaatccaatgggaagtggtgcgtaacattatcgccaaa
gaacgtcctgatgcgattctgccaaccatgggcggtcaaaccgcgctgaactgcgccctt
gagcttgaagctaaaggcgtactggctgaattcaacgttgaaatgatcggtgcaaccgcc
gatgcgattgataaagcagaagaccgtagccgcttcgacaaagccatgaagagcattggc
ttagagtgtccacgtgcgggcatcgcccacagcatggaagaggcctatggtgtactagac
ctcgttggtttcccttgtattatccgtccatcattcactatgggtggctcgggtggtggt
atcgcctacaacaaggaagagttcgaagaaatctgttctcaaggtttagatttatcgcca
actaaagagctactcatcgatgagagcttaatcggttggaaagaatacgagatggaagtg
gttcgtgaccgtaacgacaactgtatcatcgtctgttctatcgaaaacttcgacccaatg
ggcgtgcacaccggtgactctattaccgttgccccagcacaaactctgactgacaaagaa
taccagctgatgcgtaacgcctctatggcggtactgcgtgagattggtgttgaaaccggt
ggttcgaacgtacagtttggtatcaacccgaaagatggccgtatggtgatcatcgagatg
aacccgcgcgtatcacgttcatcggcactggcatctaaagcgacaggcttcccgattgcg
aaaatcgccgccaagttagcggtcggtttcaccctcgatgagctgatgaacgacatcact
ggcggccgtacgccagcgtcattcgagccagccatcgactacgtcgtgactaaagtacct
cgctttaactttgaaaagtttgctggttcaaacgatcgcttaaccactcagatgaagtca
gtgggcgaagtgatggcgattggccgtactttccaagagtcactgcaaaaagccctgcgc
ggtttagaagtcagccgtcacggctttgacccaatcactgacttaaccaaagccgatgcc
ttagcgcgtattcgcctcgagctgaaagagccaggctgtgaccgtatttggtacatcgct
gacgctatgcgtgcgggtttaactctggatgaaatcttccgtttaaccaatatcgaccca
tggttcttagtccagattgaagagctgattaagctagaaggccaagtggccgaaggtggt
ttagccggacttaacgaagagctgctgcgtaagcttaagcgtaaaggttttgccgatgcg
cgtctggcggcggtccttggcgtaaacgagactgaagtccgtaaactacgtgaccgtttt
gacatccacccagtttacaagcgcgtagatacctgcgcggctgaatttgctactgatact
gcttacatgtactcaacctatgaggaagagtgtgaagcgaacccatctgaccgtgagaaa
atcatggtgttaggtggcggtccaaaccgtatcggtcaaggtatcgaattcgattactgc
tgtgtgcacgcggcattagccctgcgtgaagacggttatgaaaccatcatggtgaactgt
aaccctgaaaccgtttctaccgactatgacacctcagatcgtctgtactttgagcctgtt
actttagaagacgtgttagaaatcgtccgtatcgagaagccaaagggcgttatcgtacag
tacggtggtcaaactccgctgaaactggctcgcgcccttgaagcggcaggtgtgcccatt
attggtactagcccagatgcgattgaccgtgctgaagaccgtgagcgtttccagcaagcg
attcaacgtctggaaatgaagcaacctgaaaacgatacagtcaccacagttgaaggtgct
gtgattgccgctgagcgtatcggttatccgctggttgttcgtccatcctacgtactgggc
ggccgcgcgatggaaatcgtttacgaccaacaggatttactgcgctacttcaacgaagcg
gtcagcgtatctaacgcttcgccagtactgttagaccacttcctagacgatgctatcgaa
gtggatatcgatgcagtatgtgacggcgaaaccgtagttatcggcgcgattatggagcat
atcgagcaggccggggttcactcaggtgactctggttgttcactgcctccttacacctta
agccaagctatccaagacgaaatgcgcgtacaagtgcgtaagcttgcgatggagctgggt
gttgtcggtctgatgaacgtacagtttgccgtgaagaataacgaaatctacatgattgaa
gttaacccacgtgcagcgcgtaccgtaccattcgtatcgaaagcgacaggagtgccgtta
gctaagattgccgcccgtgtgatggcaggtcaaagcttgaaggcacaaaacttcactcaa
gaagtgatcccacctttctactcagtgaaagaagtggtactgccatttaacaagttccct
ggcgttgacccactgttaggcccagaaatgcgctcaacgggtgaggtgatgggcgtgggc
gataccttcgccgaagcctatgctaaggcgcagttaggtgcgacttctgaagtgcctaag
tctggtcgtgctctgttgtctgtgcgtaacagcgacaagaaacgtgttgccgacttagcc
gctaaattgattgagctgggttatcaaattgatgccacccacggtactgcggttatccta
ggtgaagcgggtatcaacccacgcttagtgaacaaggtacacgaaggccgtccacacatt
cttgaccgtatcaagaacggtgagtacacctacatagtgaacaccaccgaaggccgtcaa
gcgattgaagactctcgtcaattacgtcgcggtgcactgcgttacaaagtgaactacacc
acgaccatgaacgcagcattcgccacttgtatggcgcacgctgcggatgaccgcactaac
gtgacgtcagtgcaagagctgcatcagcgtgtattggctaaataa
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