Shewanella decolorationis: D0436_06450
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Entry
D0436_06450 CDS
T09167
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00550
Peptidoglycan biosynthesis
sdeo01100
Metabolic pathways
sdeo01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D0436_06450 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D0436_06450 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdeo01011
]
D0436_06450 (mrdA)
Enzymes [BR:
sdeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
D0436_06450 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
sdeo01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
D0436_06450 (mrdA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QDZ90147
UniProt:
A0A5B8QW08
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All DBs
Position
complement(1286767..1288623)
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AA seq
618 aa
AA seq
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MSPKKRITMHDHAAEASLFKRRALFTFFCVVALLSVLVTNLYHLQVESYKDYATRSNDNR
IRVVPIAPSRGLIYDRNGVLLAENQPFYSLDLVPEKIANMSETLDELGKLIEITPDERET
FTDALKFHRRFKPLTLKNQLTEEQVAIFSVNQHRFPGISVEAGLKRNYPYASQLTHVLGY
VGKINTRDRAQLERNDQWKNYAATKDIGKQGIEKFYESLLHGTPGHLEEEVNNRGRTIRT
LKIVPPEPGQDIYLTLDLQLQQKAVELLQGHRGSIVAIDPRDGGILALVSSPSYDPNQFV
QGINSKDYSDLLNDKSRPLINRATQGQYAPASTVKPIIALLGLDEKAVTEHTRIWDPGFW
QIPGVERKYRDWKRWGHGWVNVYSAIVESCDTYFYELAYKIGVDPIARFMEQFGFGQNTG
VDIFEESAGNMPSKEWKRLKYNQAWYIGDTISVGIGQGYWTATPLQLASATAILANDGRR
FPPHLLKSIKDNTAKIDSPINELPPIELKNPRNWKIINEAMRQTAHKSRFTDASYTAAMK
TGTAQVIGVAENTKYDANKIAEHFRDNALVVAYAPFEDPKIVLAVVMENAGWGGANAGPV
ARAMLDEYMLRDTWKPTP
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgccaaaaaagcggataaccatgcacgaccacgccgccgaggcgtcactgtttaag
cgccgtgcgctgttcacttttttttgtgttgtcgccctcttgagcgtgttggtgactaat
ctttatcaccttcaggttgaatcctataaagattacgcgacacgttctaatgacaaccgt
attcgcgtcgtgcccatcgccccaagccgtggcctgatttacgacagaaacggcgtgctt
ctcgccgaaaaccaacccttttattccctcgatctggtgccagagaaaattgccaatatg
tccgaaaccttggacgaactgggcaagttaatcgagatcaccccagatgagcgcgaaacc
tttaccgacgccttaaagtttcaccgccgctttaaaccgcttactcttaaaaatcagctg
actgaagagcaagttgcgatttttagcgttaaccagcatcgctttcccgggatttccgtc
gaggcgggtttaaagcgtaactacccttatgcaagccagctcacccatgtgctgggctat
gtgggtaaaatcaacacccgtgatcgcgcccaattggagcgtaacgatcaatggaagaac
tatgctgccaccaaggatattggtaaacaaggcattgaaaagttttatgaatctctgctg
cacggcacgccgggtcacctcgaagaagaagtgaacaaccgcggccggactatccgcacg
cttaaaatcgtgccgccggaaccggggcaagatatttacttgaccctcgatttgcaattg
cagcaaaaggccgtggaattactccaaggtcaccgtggctcgattgtcgctattgatccg
agagacggtggtatcttggccctagtctcaagcccaagttacgaccctaaccagttcgtc
caagggattaacagcaaagattacagcgatttattgaacgataaatcccgcccgctgatt
aaccgcgccacccaaggccaatatgcacccgcctcaacggtcaaacccattatcgccctg
ctgggattggatgaaaaagccgtcaccgagcacacccgtatttgggaccctggcttttgg
caaatccccggcgttgagcgtaaataccgcgactggaaacgatggggccacggctgggtg
aacgtctacagcgccattgtagaatcctgcgatacctacttctatgaattggcttataaa
atcggtgtcgaccctatcgcccgctttatggaacaattcggctttggccaaaatactggt
gtcgatattttcgaagagtcggcaggcaatatgccctcaaaagaatggaagcgcttaaaa
tacaatcaggcttggtatattggcgacacgatttctgtcggtatcggtcaaggttactgg
actgcaacaccattgcaattagccagcgccaccgccattctcgccaatgatggccgccgc
ttcccaccacatttgttaaagtcgattaaagataatacggccaaaattgactcgccaatt
aacgagttaccgccgattgagcttaaaaatccgcgcaactggaaaatcatcaacgaagcc
atgcgccagactgctcataagtcacgttttaccgacgccagttacacggcggcgatgaaa
accggtacggcgcaggtcattggcgtagccgaaaacactaagtacgatgccaacaagatt
gccgagcatttccgcgataacgccctcgtcgtcgcctacgcgccctttgaagatccgaaa
atcgtcctcgcagtggtgatggaaaacgccggctggggtggcgcaaacgcaggccctgtc
gcccgcgctatgctcgatgaatacatgctaagagacacttggaaaccaacgccatga
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