Shewanella decolorationis: D0436_06620
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Entry
D0436_06620 CDS
T09167
Symbol
rlmE
Name
(GenBank) 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdeo03009
]
D0436_06620 (rlmE)
Enzymes [BR:
sdeo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
D0436_06620 (rlmE)
Ribosome biogenesis [BR:
sdeo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
D0436_06620 (rlmE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
fvmRadSAM-pep
Methyltransf_23
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
QDZ90169
UniProt:
A0A5B8QVT4
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All DBs
Position
1314822..1315451
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AA seq
209 aa
AA seq
DB search
MSGKKRTASSTRWMQEHFDDHYVKLAQKRGLRSRAAFKLEELQEKDQLIRPGMTVVDLGA
APGGWSQVAVKLVGDRGKVIACDILPMDPIVGVDFLQGDFREEKVLEALLTRVGADKVDV
VLSDMAPNMSGSDGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVKD
AFKVVKTRKPDSSRARSREVYLVATGYKL
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtaaaaaacgtacggccagttccacccgttggatgcaggaacactttgatgat
cattatgtcaaactagcacagaaacggggattgcgttctcgcgctgcgtttaagcttgag
gagctccaagagaaggaccagttgatccgcccaggaatgacagtagttgatttgggggca
gcgccaggtggttggtctcaggtagctgttaagctagtcggagacagaggtaaagttatc
gcctgcgatattttgccaatggatcccatcgtcggcgtggatttcttgcaaggggatttt
cgtgaagagaaagtgctcgaagcattgctaactcgcgtcggtgcggataaggttgacgtt
gtattatctgatatggcgcccaacatgagtggttccgatggtgtcgatcagccgcgcgcc
atgtatttagtcgaactggcgttagatatgtgtcatcaagtattggcacctaacggcagt
tttgcggtcaaagtctttcagggggaggggtttgacgaatatatgaaggcggtaaaagac
gcattcaaagtagtaaaaacacgtaaaccggactcgtcgcgggcacgctcccgtgaagtc
tatcttgtggcgacagggtacaagttgtag
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