Shewanella decolorationis: D0436_06665
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Entry
D0436_06665 CDS
T09167
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdeo03021
]
D0436_06665 (nusA)
03009 Ribosome biogenesis [BR:
sdeo03009
]
D0436_06665 (nusA)
Transcription machinery [BR:
sdeo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
D0436_06665 (nusA)
Ribosome biogenesis [BR:
sdeo03009
]
Prokaryotic type
rRNA transcription factors
D0436_06665 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
DUF2187
Glyoxalase_4
KH_2
S1_RRP5
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QDZ90176
UniProt:
A0A5B8QW85
LinkDB
All DBs
Position
1322081..1323580
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AA seq
499 aa
AA seq
DB search
MNKEILLVAEAVSNEKAVPREKIFEALETALATATKKKYEGDIDVRVSIDRKTGAYETFR
RWMVIDDNGVALENPYREITLEAARFENPEIQPGDYIEDQIESVAFDRITTQTAKQVIVQ
KVREAERAQVVEQFQDKEGELITGVVKKATRESVVVDLGNNADGVLFREDLISRESFRPG
DRVRALLYSVRPEARGAQLFLTRTKPDMLIELFRVEVPEIADELIEVMGAARDPGARAKI
AVKSNDRRIDPIGACVGMRGARVQAVSNELGGERVDIVLWDDNPAQYVINAMAPADVASI
IVDEDNHSMDIAVEAESLAQAIGRNGQNVRLATQLTGWELNVMTVEDMNKKHQAESAKVK
SLFMNALDVDEDFAQVLADEGFTSLEEVAYVPVSELLAIDGFDEDIVEALRERAKAAIST
RALASEEALDGVEPSEELLALEGVERHLAYVLASKGIVTLEDLAEQGIDDLIEIEELTEE
KAGALIMAARNICWFGEEA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagattctgctagtcgctgaggcggtttcaaatgaaaaggccgttccacgc
gagaaaatttttgaagcgctagaaactgcgctggcaactgcgaccaagaaaaaatacgaa
ggcgatatcgacgttcgtgtttctatcgaccgtaaaaccggcgcctatgaaactttccgc
cgctggatggttatcgacgataacggtgttgcgttagaaaacccatatcgcgaaatcacc
ttggaagctgcgcgttttgaaaacccagaaatccaaccaggggattacatcgaagatcag
atcgaatctgttgccttcgaccgtattactactcaaaccgctaagcaagtgatcgtacaa
aaagtgcgtgaagcagagcgtgcacaagtggttgaacagttccaagataaagaaggcgag
ctgatcactggtgtggtgaaaaaagcgacccgtgaaagcgtggtagttgacttaggtaac
aacgctgatggcgtattgttccgtgaagatttaatttcacgcgaatctttccgtcctggt
gaccgcgtacgtgctctgctgtattcagtacgtcctgaggcacgcggcgcgcagttattc
ttaactcgcactaagccagacatgctgattgagctgttccgtgttgaagtaccggaaatt
gccgatgagcttattgaagtgatgggcgccgcccgtgacccaggtgcacgcgctaagatc
gccgtgaaatcaaatgaccgtcgtatcgacccaatcggtgcttgcgtgggtatgcgtggc
gcacgcgtccaagcggtatcgaatgaactgggtggcgagcgtgtcgatatcgtgttgtgg
gatgataatccagcacaatatgtgatcaacgcaatggcgcctgccgatgtggcttctatc
atcgttgatgaagacaaccactcaatggatatcgccgttgaagcggaaagtctggcgcaa
gccattggccgtaacggtcaaaacgtccgtttagcgactcaactgactggttgggaactg
aacgtgatgacagtggaagacatgaacaagaagcaccaagccgagagcgctaaggtgaaa
agcttattcatgaacgcactggatgtagatgaagattttgctcaagtactggctgacgaa
ggctttacttctctcgaagaagtagcttacgtacctgtatctgaattattagcaattgat
ggcttcgatgaagatattgttgaagcattacgtgagcgtgcaaaagcggcgatctcaact
cgagctctcgcctctgaagaagcactagatggtgtggagccaagtgaagagttattagca
cttgaaggtgttgaaagacacttagcctatgttttagcaagcaaaggtatcgtgactcta
gaagacttggctgaacaaggcattgatgatttgatcgaaattgaagaattgacagaagaa
aaagcaggtgcgctgatcatggctgcccgcaacatctgttggtttggcgaagaagcataa
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