Shewanella decolorationis: D0436_06825
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Entry
D0436_06825 CDS
T09167
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
D0436_06825
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdeo01007
]
D0436_06825
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdeo03016
]
D0436_06825
Enzymes [BR:
sdeo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
D0436_06825
Amino acid related enzymes [BR:
sdeo01007
]
Aminoacyl-tRNA synthetase
Class I (U)
D0436_06825
Transfer RNA biogenesis [BR:
sdeo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
D0436_06825
Prokaryotic type
D0436_06825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
QDZ90200
UniProt:
A0A5B8QU55
LinkDB
All DBs
Position
3607034..3609910
Genome browser
AA seq
958 aa
AA seq
DB search
MEKTYDPQSIEQTLYQNWEEQGYFKPHGDASQGNYCIMIPPPNVTGSLHMGHAFQDTIMD
TLIRYQRMKGKNTLWQVGTDHAGIATQMLVERKLEAEEGKSRHDLGRDAFMEKVWEWKAQ
SGGTITKQLRRMGASVDWDRERFTMDEGLSKAVQEVFVRLYEDDLIYRGKRLVNWDPKLH
TAISDLEVENKEKQGHMWHLRYPLADGELTADGKDYLEVATTRPETMLGDSAVAVHPDDE
RYQALIGKFILLPIVNRRIPIVADDYVDMEFGTGCVKITPAHDFNDYEVGKRHKLPMFNV
LTLDAAIRASAEVVNTDGTINTSLDGSLPERYAGLDRFKARDAIVAEFETLGLLEKIAPH
GLKVPYGDRSGVVIEPMLTDQWYVAVAPMAKTAIEAVENGDIKFVPQQYENMYFSWMRDI
QDWCISRQLWWGHRIPAWYDANGKVYVGRTEAEVRAKHNIDDAIALRQDEDVLDTWFSSA
LWTFSTLGWPDNVEDLKTFHPTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPFKT
VYVTGLIRDEAGNKMSKSKGNVLDPLDMIDGIDLEALVEKRTGNMMQPQLAAKIEKSTRK
EFENGIEAHGTDALRFTLAAMASTGRDINWDMKRLDGYRSFCNKLWNASRYVLMNTEGQD
CGPNSPDYQGGEMELSLADRWIIGLFNQTVKTYDDHMANYRFDLAANTLYEFTWNQFCDW
YLELTKPVLQNGNEAQMRGTRHTLVNVLEAMQRLMHPMMPYITETIWQRVKPLTGAQGDT
IMLAPFPSYDAAKVDATAMADLEWVKQVIVAVRNIRAELNIAPSKPLNALLRGVSAQDQA
RIEANQAFFTTLARLESMTILGEGETAPMSTTGLIGEMELLIPMAGLVDVAAEMARIDKQ
LEKLTQEIGRIEGKLSNEGFVAKAPPAVIDKERAKMADLTRDMDKLKEQKAEFAKLEA
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaacatacgatcctcagtccattgagcagactctttaccaaaactgggaagag
caaggttactttaagccccacggcgatgcctcacagggcaactattgcatcatgatcccg
ccacccaacgtgacgggtagcctgcacatgggccacgctttccaagataccatcatggat
accctgatccgctaccaacgtatgaagggcaaaaacaccctatggcaagtcggtactgac
catgcgggtattgcgactcaaatgctggttgagcgtaagcttgaagccgaagaaggcaag
agccgccatgaccttggccgcgatgcctttatggaaaaagtatgggaatggaaagcgcaa
tcaggtggcaccatcactaagcagctacgtcgtatgggcgcctctgtggattgggaccgt
gagcgtttcactatggacgaaggcttgtctaaagccgttcaagaagtgtttgtccgtctc
tatgaagacgatttgatttaccgtggtaaacgcttagtgaactgggatcctaaactgcac
accgcgatttcagatctcgaagtggaaaacaaagaaaagcaaggccacatgtggcatctg
cgttatccattagccgacggcgagctgaccgcagacggtaaagattacctcgaagtcgcc
accacgcgacctgaaactatgctgggtgatagcgcagtagctgttcatccagacgatgag
cgttatcaagcactgatcggcaaatttattctgctgcctatcgttaatcgtcgcatccct
atcgttgccgatgactatgtagacatggagtttggtacaggctgtgtgaagatcacccct
gcccacgactttaacgactatgaagtcggtaaacgtcacaaacttcctatgttcaacgtg
ttgaccttagatgcagccattcgtgcatccgccgaagtcgtcaatactgatggcacaatc
aatactagcttagatggcagcctgccagagcgttatgcaggtttagatcgtttcaaagcc
cgtgatgccattgtggcagagtttgaaactttaggtctgctcgaaaaaatcgcgccacac
ggcctaaaagtgccctacggtgaccgctcaggcgtagttattgagccaatgctgaccgac
caatggtacgttgccgttgcgcctatggccaagaccgctatcgaagccgttgaaaatggc
gatattaagttcgtgcctcagcaatacgaaaacatgtacttctcttggatgcgcgacatt
caagattggtgtatctctcgccaattatggtggggtcaccgcatccctgcttggtacgat
gcgaacggtaaggtctatgtcggccgcacagaagctgaagtgcgtgctaagcacaatatc
gatgatgctatcgccctgcgtcaagatgaagacgtactggatacctggttcagctcagcc
ctgtggacattctcgaccttaggctggcctgacaatgttgaagatttaaaaaccttccat
ccaaccgacgtgttggtaacgggttttgacatcatcttcttctgggttgcccgtatgatc
atgatgaccatgcacttcatcaaagatgaagacggtaagccacaggtgccatttaaaacc
gtttatgtgaccggccttatccgcgatgaagcgggtaacaagatgtcaaaatctaagggc
aacgtacttgacccattggatatgattgacggtatcgatctagaagccctcgttgaaaaa
cgtactggcaacatgatgcagccacaactggccgccaagattgaaaagagcacccgtaaa
gagtttgaaaatggtatcgaagcccacggtactgatgccctgcgctttactctagcggca
atggcatcaactggccgtgatatcaactgggatatgaagcgtttagacggttaccgcagc
ttctgtaacaagctttggaacgcatcacgttacgtgctgatgaataccgaaggccaagat
tgcggcccgaactcaccggattaccaaggcggtgagatggaactgtcactggcggatcgc
tggatcatcggtttattcaaccaaaccgtaaaaacctacgacgaccacatggcaaactac
cgcttcgacctcgcagccaacaccttgtacgagttcacttggaaccagttctgcgattgg
tacttagagttaactaagccagtactgcaaaacggcaatgaagcgcaaatgcgcggcacc
cgccatacgttggtcaatgtgttagaagcgatgcaacgtctgatgcacccaatgatgcca
tacatcactgaaaccatctggcaacgcgttaaaccactgactggcgcccaaggcgacacc
atcatgctggcaccattcccaagctatgatgccgccaaagtagatgcgaccgcgatggcc
gacctcgagtgggttaagcaagtgattgttgcagtacgtaatatccgtgccgagctcaat
atcgcgccttctaagccattaaacgccctactgcgtggcgtgagtgcccaagaccaagcc
cgcattgaggctaaccaagccttcttcacaacgcttgcgcgcttagagagcatgacgatt
cttggcgaaggtgaaacggcgccaatgtcgaccacaggtctaattggcgaaatggaatta
ttaattcctatggcaggtctggtggatgtggcggccgaaatggctcgtatcgacaagcag
cttgaaaagctgactcaagagattggccgtatcgaaggtaaattatcgaatgaaggcttc
gtggcgaaagcaccgccagcagttatcgataaagagcgcgccaagatggccgatttgacc
cgcgatatggacaaactaaaagagcaaaaagccgagtttgctaagttagaagcctaa
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