Shewanella decolorationis: D0436_07425
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Entry
D0436_07425 CDS
T09167
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K18301
TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdeo03000
]
D0436_07425
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
sdeo01504
]
D0436_07425
Transcription factors [BR:
sdeo03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
D0436_07425
Antimicrobial resistance genes [BR:
sdeo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
D0436_07425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
LacI
HTH_Tnp_1_2
HTH_22
FrhB_FdhB_C
FrsA-like
DUF952
HTH_10
HTH_7
HTH_40
Motif
Other DBs
NCBI-ProteinID:
QDZ90313
UniProt:
A0A5B8QUU1
LinkDB
All DBs
Position
complement(3479586..3480206)
Genome browser
AA seq
206 aa
AA seq
DB search
MTQSSDIPMSRSEQKKQQVLVAAIDLFCRQGFPHTSMDEVAKQAGVSKQTVYSHYGSKDD
LFVAAIESKCVGHNLNADLLSDPSQPEATLTEFALQFGEMIVSPEAITVFKACVAQSESH
PEVSRLFFEAGPQHMLAMLTKYLIAVEALGLYRFPQPHHCAVRLCLMLFGELKLRLELGL
ETEPLLGEREQYIRGCAEMFLKAYRV
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgactcagtcctccgatatcccgatgagccgcagtgaacaaaagaaacagcaagtgctg
gtggcggccattgacttgttttgccgccaggggtttccccataccagcatggatgaagtg
gcgaaacaggcgggcgtgtccaaacaaacggtgtactcccactacggcagtaaagatgat
ttgtttgtggcggcgattgaatccaaatgcgtcggccacaacttaaatgccgacttactc
agcgatccaagtcaacccgaagcgacccttaccgaatttgcgctgcaatttggtgagatg
attgttagccctgaggcgattaccgtatttaaagcctgtgtggcgcaatcggagagccac
cctgaagtgtcgcgattgttttttgaggcggggccacagcatatgcttgcgatgctgaca
aagtatttaatcgccgtagaggcacttgggttatatcgctttccacaaccgcatcattgt
gcggtacgtttatgtttgatgttgtttggcgaattaaaactcaggttagagttagggctt
gaaaccgagcctttattgggggagcgtgagcagtatattcggggttgtgccgagatgttt
ttaaaagcctaccgagtgtaa
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