Shewanella decolorationis: D0436_07460
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Entry
D0436_07460 CDS
T09167
Name
(GenBank) thymidylate synthase
KO
K00560
thymidylate synthase [EC:
2.1.1.45
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00240
Pyrimidine metabolism
sdeo00670
One carbon pool by folate
sdeo01100
Metabolic pathways
sdeo01232
Nucleotide metabolism
Module
sdeo_M00938
Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
D0436_07460
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
D0436_07460
Enzymes [BR:
sdeo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.45 thymidylate synthase
D0436_07460
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Gene cluster
GFIT
Motif
Pfam:
aGPT-Pplase3
ADDT
Thymidylat_synt
Motif
Other DBs
NCBI-ProteinID:
QDZ93194
UniProt:
A0A5B8R2Y1
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All DBs
Position
3471942..3473885
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AA seq
647 aa
AA seq
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MNFEAATLDDLMHDVFEHILNHGHNNNASKGPNIEVLGCELRLTNPIARVSRTESRGLIF
SCLGELFWYLSGSNDGCHIAKYIPKYGTFVEDDGSIHGGYGKRLFNMHEKYNQIKRVIEQ
LKIGTGTRKAVIQLFDSSDLAEDYKDIPCTLNLQFVVRNKKLHMFTMMRSNDAYIGLPHD
IFVFTMLQEMLAKELECGLGIYHHYVASLHIYNKNINSAKRFINEGFQATDSIMDEMPCI
GFFSIRNELLKFESEIRHGIDLNINELDLCDYWKDILRLLQFYHKKESGNFQDLRYASEV
RKKITNKKYQGLINNRERIKKSKAIKKIEGNNMQKRFDNISDIISGIEAFEHEQFKLAGL
QRVENYISLSMQITDSIRRIKFIEEINKKHISEHRKNPHSDIFDPLRAAWLHIRENNKNE
AYWLIFLATHFGKHKKEGWKLCADIYGGLGEELWTWNRVSHNPNDFSLWFRKASIEIKKN
KPQRKFGNHRKYESLNYNSSRPLQTVVQTYVDWVGVSKDHETRFLELSNSNNVNNKYELF
DVAYKSMKGILSFGRTAKFDYLTMLRKFSLQNIEPQNLYLSGATGPKRGTSFLFFGNKDS
NYSVEELNQNLNLLAEYLPIDILSSQVLEDALCNWQKSPSAYRYFGG
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
gtgaattttgaagcagctacattagatgatctaatgcacgacgtttttgagcatattcta
aatcatggtcataataacaacgcaagcaaaggaccaaacatcgaagtgctcggatgcgaa
ctaaggttaactaaccctattgcaagggtgagcaggactgaatctcgaggtttaatattt
agctgcttaggagaattattttggtatctttcaggtagtaatgatggctgtcacatagca
aaatatatacctaagtatggtacctttgtagaagatgatggttcaattcatggtggttat
ggaaagagacttttcaacatgcatgaaaagtataatcaaataaaacgagtgatagaacaa
ttaaaaattggaactggaacaagaaaagctgtaatacaactgttcgactcatctgattta
gccgaggattataaagatatcccgtgcactcttaacttgcagtttgtagttagaaataaa
aaacttcatatgtttacaatgatgcgttcaaatgatgcatatattggtttacctcacgac
atattcgtattcacaatgttgcaagaaatgctcgcaaaagagcttgaatgcggattaggt
atctaccaccactatgttgcgagtctacatatctataataaaaacattaactccgcaaag
cgttttattaatgaaggatttcaagcaactgatagcattatggatgaaatgccttgcatt
ggattctttagcattagaaatgaactattaaaattcgaaagtgaaattaggcatggtatt
gacttaaatattaatgaactggacctttgcgattactggaaagatattttaagacttttg
cagttttatcacaagaaagaatcaggtaactttcaagatttaaggtatgccagtgaagtt
agaaaaaaaataactaacaaaaaataccaaggcttaataaataacagagaaagaatcaag
aaatcaaaagccataaagaaaatagaagggaataacatgcaaaaaaggtttgacaacatt
agtgatatcattagcggtattgaagcattcgaacacgaacaatttaagctagcaggctta
caaagagtggaaaactatatttctttatcaatgcaaattactgatagcattagaagaata
aaatttatagaagaaataaacaaaaaacatatttctgaacatcgaaaaaaccctcattct
gatatatttgacccattacgagccgcatggttacatataagggaaaacaataaaaatgag
gcatattggttgatttttttagcaacgcactttggaaaacataagaaagaaggttggaaa
ctatgtgctgatatttatggcggtttgggcgaggaattatggacttggaatagagtatct
cataatccaaatgatttttctttatggttcagaaaagctagcatagaaattaaaaagaat
aagccacaaagaaaatttggaaatcacagaaaatatgagtcattgaattataattcgagt
agaccacttcaaactgttgtacagacatatgtggattgggttggtgtaagtaaagatcat
gaaacgaggtttttagagctatcaaactcaaacaatgttaataataaatatgaattattt
gatgtcgcatataaatccatgaaaggcatattatcatttggtagaacagccaaatttgac
tatttgacaatgctcagaaagttttcactgcaaaatatagaaccgcaaaacctatatctc
tctggtgcaacaggccccaaaagaggaacaagttttttgttttttggaaacaaagattct
aactatagtgttgaagaattaaatcaaaatttgaatttattagcagagtatttaccaata
gatattctatcctcccaagtattagaggatgctttatgcaattggcaaaaatcaccatct
gcttatcggtattttggcggctaa
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