Shewanella decolorationis: D0436_08035
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Entry
D0436_08035 CDS
T09167
Name
(GenBank) H-NS histone family protein
KO
K03746
DNA-binding protein H-NS
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdeo03036
]
D0436_08035
03400 DNA repair and recombination proteins [BR:
sdeo03400
]
D0436_08035
Chromosome and associated proteins [BR:
sdeo03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
D0436_08035
DNA repair and recombination proteins [BR:
sdeo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D0436_08035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
YkyA
Viral_P18
EAD7
Motif
Other DBs
NCBI-ProteinID:
QDZ90426
UniProt:
A0A5B8QWV4
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All DBs
Position
3352659..3353051
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AA seq
130 aa
AA seq
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MSEFLEILTHGRRFKAAVKDLSVEELRDLAAKLDKILVERESMAAEEQQAIAARNAKIEE
IRQQMEAVGLSIDDLGGVAVKAVGKKRAPRPAKYQIEVNGEVIQWTGQGRMPTVFKNEVN
KGRSMDDFLI
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatttttagagatattaactcacggtcgtcgttttaaagctgcggtaaaagat
ctcagcgttgaagaactgcgtgatttagcggctaagctagataaaattttagttgagcgt
gagtcaatggcagcagaagagcagcaagctattgctgcacgtaatgctaaaatcgaagaa
atccgccaacaaatggaagcagttggtttatcaatcgacgacttaggtggcgtagcagtt
aaagctgtgggtaaaaaacgcgctccacgtccagcaaaatatcaaattgaagttaacggc
gaagtgatccagtggactggtcaaggtcgtatgccaacggtatttaagaacgaagtcaat
aaaggccgttctatggatgatttcttaatctaa
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