Shewanella decolorationis: D0436_08050
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Entry
D0436_08050 CDS
T09167
Name
(GenBank) Na+/H+ antiporter NhaC family protein
KO
K18218
tetracycline resistance efflux pump
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdeo02000
]
D0436_08050
01504 Antimicrobial resistance genes [BR:
sdeo01504
]
D0436_08050
Transporters [BR:
sdeo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
D0436_08050
Antimicrobial resistance genes [BR:
sdeo01504
]
Gene variants
Tetracycline resistance genes
Transporters
D0436_08050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
Ldh_2
Motif
Other DBs
NCBI-ProteinID:
QDZ90429
UniProt:
A0A5B8QWJ6
LinkDB
All DBs
Position
complement(3348732..3350300)
Genome browser
AA seq
522 aa
AA seq
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MTVVSYADSALSLLPPVVAIVLAIFTRRVLLSLGLGIVIGVLLLNQFSPVASGEFLFNSV
KGLFWSEDGVNSWNLYILGFLIVLGMITALITVSGSARAFADWARLHIRNKRDAKLLTMF
LGCVVFIDDYFNSLVVGSVARPVTDRYYISRAKLAYLLDSTAAPVCVISPVSSWGAYIIA
LIGGILTAHGFADSGHLSVFIQMIPMNFYAIFSLLLLLCVAFMGLDIGPMREHELNAQRG
NLYDETKGLPPGANADLPEAETGKILGLFLPITVLVFATLYFMIDSGAQVLAKEGIEFNI
ISAFEKTDVSSSLFFGALIGLAVALVLNLVQGVEKSMVVKGVVQGARSMLPAIYILLFAW
TIAGVIGQLETGKFMASLATGNIPFAFLPALMFVLAGLTAFSTGTSWGTFGIMLPIAADM
AMGSHTAMMLPMLASVLAGAVFGDHCSPISDTTILSSTGASCHHIDHVVTQLPYAVIVAL
ISMVGYVVLGFTESVNAGLLTCGVLFVLSIVWLRLKSQSNAK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgactgtagtaagttacgccgattcggcactttctctgctgccgcctgtggtcgcaatt
gtgttggcgattttcactcgccgcgttctcctttccctcggtttaggtattgtgattggg
gtgttattactcaatcaattttcacctgtggccagcggtgagtttttatttaacagtgta
aaaggacttttttggtcagaagatggcgtaaattcttggaatttatacattcttggcttt
ttaattgtattagggatgatcacggcattaattaccgtcagtggtagtgctcgggcattt
gccgattgggcgcgcctgcatattcgcaataaacgcgatgccaaattactgaccatgttt
ttaggctgtgttgtctttattgacgattatttcaatagcttagtcgttggttctgtcgca
aggcccgtcaccgaccgttattatatttcccgcgctaagttagcctatttattagattca
acggcagcgccggtttgtgttatttcgccggtatccagttggggcgcttatattattgcg
ttgatcggcggcatattaaccgcccacggttttgctgattctggtcatttgagtgtgttt
attcaaatgatccctatgaatttctacgctattttctctttattattattactttgtgtt
gcatttatgggcttagatattggccctatgcgtgagcatgaattaaatgcgcagcgcggt
aatttatacgatgagactaaaggattaccgcccggagcgaatgccgatttacccgaagcc
gaaacgggtaagatccttggtttattcttacctattaccgtgctggtatttgcgaccctg
tattttatgatcgacagcggtgcccaggtattagctaaagaaggcattgaatttaatatt
atttcagcttttgaaaaaaccgatgtcagttcatcactgttctttggtgccctgattggt
ttggcggttgcgctggtacttaacctagtgcaaggcgttgaaaagtcgatggtcgtcaaa
ggcgtggtgcagggcgctcgttctatgctgcctgcgatttacatcctgttatttgcttgg
accattgccggtgtgattggccagcttgaaaccggtaagtttatggcgagcctcgccaca
ggcaacattccctttgccttcttacctgcgttgatgtttgtgttagcgggtctaacggcg
ttttctaccggcaccagttggggcacgttcggcattatgctaccgattgccgccgatatg
gcgatgggcagccatacagccatgatgttacctatgctggcttcggttttggcgggtgcg
gtatttggtgatcactgctcaccgatttcggataccacgattttgtcgtcaacaggcgcg
agctgtcaccatatcgaccatgttgtgactcagttgccttacgctgtgattgtggcgctg
atcagcatggtaggttatgtggtgcttggctttacagaatcggtgaatgcgggactgttg
acctgtggcgtgctgtttgtcttaagcattgtgtggttacgactcaagtcccaaagcaac
gcgaaataa
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