Shewanella decolorationis: D0436_08095
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Entry
D0436_08095 CDS
T09167
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D0436_08095
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdeo02000
]
D0436_08095
Transporters [BR:
sdeo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
D0436_08095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Geminin
KRE1
Motif
Other DBs
NCBI-ProteinID:
QDZ90438
UniProt:
A0A5B8QWN8
LinkDB
All DBs
Position
3333209..3334231
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AA seq
340 aa
AA seq
DB search
MTLNQQMGITRPLKTVAKMLALASVFATSFNLFAAPVEIKFSHVVAENTPKGQMALKFKE
LVEQRLPGEYTVSVFPNSQLFGDNNELAALLLNDVQFVAPSLSKFERYTKRLQVFDLPFL
FNDMDAVNRFQQGEAGQALLNSMSRKGIVGLGYLHNGMKQFSANTPLKQPSDAKGLKFRV
MASDVLAAQFDAVGAIPVKKPFSEVFTLLQTRAIDGQENTWSNTYSQKFYEVQSHITESN
HGVLDYMVVTSDAFWKSLPADKRKVIKEALDESIALGNKIAAEKDNEDKQLILDSKRSQL
VTLTPEERQKWIDVMKPVWAKFEDQVGKDVIEAAVAANKQ
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgacattgaatcaacaaatgggtatcacacgtccattaaaaaccgtagctaagatgctg
gcactggcctcagtgttcgcgaccagctttaacctgtttgcggcgcccgttgaaatcaag
ttctcccacgtggttgcagaaaacacgccaaagggtcaaatggcgttgaagtttaaagaa
ctcgttgagcaacgtttacctggtgaatatacggtcagtgtattccctaactcacagtta
tttggggataacaacgagttagcggcactgctgttaaacgatgtgcaatttgtagcacct
tctctctctaaatttgagcgttacactaagcgcctacaggttttcgacctgccattcctg
tttaatgacatggatgcagtaaaccgtttccaacaaggcgaagctggccaagccctgctg
aactcaatgagccgtaaagggattgtcggtttaggttatctgcacaatggtatgaagcag
ttctctgctaacacaccactgaaacaaccttctgatgctaaaggcttaaaattccgtgta
atggcatctgacgtattagccgcccagtttgatgctgtgggcgctatcccagtgaagaaa
ccattctctgaagtgtttaccctgctgcaaacccgcgcaatcgatggtcaagaaaacact
tggtctaacacctactcacaaaaattctatgaagttcaaagccatattacagaaagtaac
cacggcgtgctggactacatggtcgtgacgtctgacgccttctggaaaagcttaccagcg
gataaacgtaaagtgatcaaagaagccttagatgaatctatcgctttaggtaacaagatc
gctgctgaaaaagataacgaagacaagcaattaatccttgattctaaacgttcacaactg
gtgaccttaacaccagaagaacgtcaaaaatggattgatgtaatgaaacctgtttgggcg
aagtttgaagaccaagtaggtaaagatgtgattgaagccgctgttgctgcaaataaacaa
taa
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