Shewanella decolorationis: D0436_08455
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Entry
D0436_08455 CDS
T09167
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdeo03016
]
D0436_08455 (truA)
Enzymes [BR:
sdeo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
D0436_08455 (truA)
Transfer RNA biogenesis [BR:
sdeo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D0436_08455 (truA)
Prokaryotic type
D0436_08455 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
ArgoL1
Motif
Other DBs
NCBI-ProteinID:
QDZ90500
UniProt:
A0A5B8QUX1
LinkDB
All DBs
Position
complement(3250624..3251409)
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AA seq
261 aa
AA seq
DB search
MRIALGIEYDGSGYFGWQRQAEVDSVQGQLEQALSKVANEPISLFCAGRTDAGVHATGQV
VHFETNAIRNEGAWTLGVNANLPDNIAVRWVKEVDDSFHARFSATARRYRYVIYNHNFRP
GILRHGVSHYHGDIDADKMHVAAQALLGEQDFTSFRAIQCQSKTPFRNVHSVKVTRQGMY
VIVDISANAFLHHMVRNIVGSLLEIGLGNQPLTWMADLLALKDRNQAAATAKPNGLYLVD
VTYPEQYQLPKLALGPLFMLD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcggattgcattaggtattgaatatgacggaagtggttatttcggttggcagcgtcag
gccgaagtcgattcagtacaagggcaattagaacaagccttatcaaaggtggcgaacgaa
cccattagtttgttctgtgccggaagaaccgatgccggcgttcatgcaacggggcaggtg
gtgcatttcgagactaatgccatacgtaacgaaggcgcgtggaccttaggggtgaatgcc
aatttgcccgataatatcgccgttcgttgggtaaaagaggtggatgacagtttccacgcc
cgtttttcggccacggccagacgttaccgctatgtgatttacaatcataatttccgcccc
gggatcctgcgtcacggcgtgagccattaccacggtgatatcgacgccgataaaatgcat
gttgcggcgcaggcgctgctcggtgagcaggactttaccagttttcgcgctattcaatgt
caatcgaaaaccccatttcgcaatgttcacagcgtaaaagtgacgcgtcagggcatgtat
gtgattgtcgatatttctgctaacgccttcttgcaccatatggtgcgtaacattgtcggc
tccctgctggaaatcggtctaggcaatcagcctctgacctggatggcggatttactggcc
cttaaagatcgaaatcaagcggcggccaccgccaaacccaatggactctatttagtcgat
gtgacatatcccgagcaatatcaactgcctaagttggctttagggccattgtttatgctg
gattaa
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