KEGG   Shewanella decolorationis: D0436_08590
Entry
D0436_08590       CDS       T09167                                 
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
sdeo  Shewanella decolorationis
Pathway
sdeo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sdeo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    D0436_08590 (xthA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdeo03400]
    D0436_08590 (xthA)
Enzymes [BR:sdeo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     D0436_08590 (xthA)
DNA repair and recombination proteins [BR:sdeo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     D0436_08590 (xthA)
SSDB
Motif
Pfam: Exo_endo_phos DUF3014
Other DBs
NCBI-ProteinID: QDZ90525
UniProt: A0A5B8QW14
LinkDB
Position
3218746..3219558
AA seq 270 aa
MKIVSFNINGLRSRLHQLQALIDSHQPDIIGLQETKVHDEAFPLAEVEAMGYHVHYHGGK
AHYGVAMLSKVAPLKVQKGFATDEEDAQRRMIIGTFAQANGRPLTVLNGYFPQGESIDHP
TKYPAKRKFYQDLMAHLHANHSNDEDIAIIGDINISPIDLDIGIGEVNRKRWLKTGKCSF
QPEEREWLKTLQDWGLVDTFRQLHPDRSERYSWFDYRSKGFDDNRGLRIDVILATPSLAA
RLVESDVDYDLRGIDKPSDHAPIWSTFKEA
NT seq 813 nt   +upstreamnt  +downstreamnt
atgaaaatcgtttctttcaatatcaatggattgcgttctcgcctgcatcaattgcaagcg
ttaatcgacagccatcagcccgatattatcggcctgcaagaaaccaaagtgcacgatgaa
gccttcccgctcgccgaagtcgaagccatgggctatcacgtgcattaccacggtggcaag
gcacactatggcgtagccatgctctccaaagtcgccccacttaaggtgcaaaaggggttt
gcaaccgatgaagaagatgcccagcgccgtatgattatcggcacatttgctcaggcaaat
ggccgtccgctaacagtgctgaatggttatttccctcagggcgaaagcattgaccatccg
acaaagtatcctgctaagcggaagttttatcaggacttaatggcgcatttgcacgctaat
catagcaatgatgaagatatcgccatcattggggatatcaatatttcgcccatcgatttg
gatatcggcattggtgaagtcaaccgcaaacgttggctaaaaaccggaaaatgcagcttc
caacccgaagagcgtgaatggctcaaaaccctgcaagattggggattagtggataccttc
cgtcaactgcaccccgaccgcagcgagcgttattcatggttcgattaccgcagcaaaggc
ttcgatgataaccgcggccttcgcatcgatgtgatcttagcgacgccgtcactggctgcg
cgtttagtcgaatccgacgtcgattacgatctgcgcggtatcgataaaccctcagatcat
gcgccaatttggagcacctttaaagaagcctaa

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