Shewanella decolorationis: D0436_09020
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Entry
D0436_09020 CDS
T09167
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdeo03036
]
D0436_09020 (smc)
Chromosome and associated proteins [BR:
sdeo03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
D0436_09020 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QDZ90599
UniProt:
A0A5B8QX33
LinkDB
All DBs
Position
complement(3134204..3137632)
Genome browser
AA seq
1142 aa
AA seq
DB search
MRLKQIKLAGFKSFVDPTKIPFLQALSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS
MSDVIFNGSSARKPVSVAGVELVFENKEGRLAGQYASYEEISVKRQVSRDGESWYFLNGQ
KCRRKDITDLFMGTGLGPRSYAIIEQGTISRLIESKPQDLRTFIEEAAGISRYKERRRET
ENRIRHTRENLERLGDIRSELAKQLEKLSQQAKAAKQYRELKQAERKTHAELLVMRYQEL
QSQMASLSEQISSLELQQAAAQSLAQTGELESTELQLTLSHLAEQEQQAVEAYYLTGTEI
AKLEQQLQSQKQRDAQLHNQLEQLSEQIIQNQAKLAAYQASFQALEAELSQLAPQHELQQ
EMLDELQAQWEMSVSRSEAQSESARVLAAAVAQHKLQLELHRSKLAHQQQLNAHKTQLHQ
EQQQELASLNAHALEDSSASLNDEIAQLEQALAEQVEINQEFESTLAADTHALDLARGEF
EQLSQRLTSMRARFELVEQWLAKQEELSDKPQLWQSIQVENGWEAAAELALQGLMTLPVG
VNANEIGFYADAALAADAHFDGSPILGAKLNLAPWLKGLKWADNLASAQALLPSLAADER
IVTADGYLLGKGFLIAKQDNSQSLVQLSKEQTELSEAIADCEQAKAIQQAKLDELAQQLA
QVRDSLSQGTKRLHQLQLDKATKSTQLNNAEAQAKQREAKRGQLAETVARTHAELAELAE
QLILLSEQEDELAEALELSLEQQQQQSQDAQGDMARHQALKAQIGDAERRLTSLNASLQS
IATRMAVSTEQIELQRVRVSELVHSKETLSAQLANVAAQEGDQQTAQLSEQLAQLLNQQQ
SQQQALKSLRSQQSSLTETLNSIGLKQKQELGKLEGLTQSLSTLKLRREGLKGQADSQLA
ALSEQQIVLAQIVDSLPADGHPDKWQRDLDQIRQKIIRLGAINLAAIEEFEQQSERKSYL
DHQDEDLNNGLATLEEAIRKIDKETRTRFKATFDAVNEDLGRLFPKVFGGGRAYLALTED
DLLETGVTIMAQPPGKKNSTIHLLSGGEKALTALSLVFAIFRLNPAPFCMLDEVDAPLDD
ANVERFCRLLKEMSQSVQFIYISHNKITMEMADQLIGVTMHEPGVSRIVAVDLEQAVAMA
DA
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgagattaaaacaaataaaacttgccggctttaagtcgtttgtcgatcccaccaaaatt
ccgtttttacaggcattaagcgccattattggcccaaatggctgcggtaagtccaacgtg
attgacgccgtgcgttgggtgctgggcgaaagctcggcaaagcatttgcgcggcgactcc
atgagtgacgtgatttttaacggctccagcgcccgtaagcccgtgtctgtggcgggcgtc
gaactggtgtttgaaaataaagagggccgccttgcgggtcaatacgccagttatgaagaa
atctcggttaaacggcaggtgagccgtgacggtgagtcttggtattttctcaatggccaa
aagtgtcgccgtaaagacatcaccgatctgtttatggggaccgggcttgggccgcgcagt
tacgccattatcgaacagggcacgatttcacgtttaatcgaatctaaaccccaagattta
cggacttttattgaagaagcggcggggatttcccgctataaagaacggcggcgtgaaacg
gaaaaccgtatccgccatacccgcgaaaacttggagcgtttaggggatattcgcagcgag
ttagccaaacaactggaaaaactcagtcagcaggccaaggcggcgaagcaatatcgtgag
ctgaaacaagctgagcgtaaaacccatgccgagctgctggtgatgcgctatcaagagctg
cagagccaaatggcgagtctatcggagcagattagctcgctcgagctgcaacaagcggcg
gcccagtccttagcgcaaactggcgagttagaaagcaccgagttgcaactcacactttcg
cacttagccgagcaggagcagcaggcggtcgaagcctattacctgactggtaccgaaatc
gccaagcttgagcaacagttacagagccaaaagcagcgcgacgcccagttgcataatcag
cttgagcagttgagtgagcaaatcattcaaaaccaagccaaattagccgcttaccaagcc
agctttcaagcgcttgaggcggagcttagccaacttgcgccgcaacatgagttgcagcaa
gagatgctcgatgagctgcaagcccagtgggagatgagcgtttcgcgcagtgaggcccaa
agtgaaagcgccagagtgctagcggcggccgtcgctcagcataagctgcaattagagtta
caccgcagcaaactggctcatcagcaacaattaaatgcccataaaacccagctacatcaa
gagcaacaacaagagctggcctcgcttaatgcgcatgccctcgaagatagcagcgcatca
cttaatgacgagattgcccagttagagcaagcattagctgaacaagttgaaatcaatcaa
gagtttgaatccactctggctgccgatactcatgcgttagatttggcccgcggtgagttt
gagcaattatcacagcgtttaacctcgatgcgggcacgcttcgaactggttgaacaatgg
cttgcgaaacaagaagagttaagtgataagccgcagctgtggcaaagcattcaagtggaa
aacggctgggaagccgctgccgaactggcgctgcagggattgatgacgctgcccgtgggc
gttaacgccaatgaaatagggttttatgccgatgcggccttggcggcggatgcgcatttc
gatggctctcccattttaggtgccaaattgaaccttgctccttggcttaagggactcaaa
tgggccgataatctggccagcgcacaagcactgctgccgagcttggcggccgatgagcga
atcgtgaccgccgacggttacttgctcggcaaaggttttttgattgctaaacaagacaat
agccaatccttagtgcaattgagtaaagagcaaaccgagctgagcgaggccatcgctgat
tgcgagcaggcaaaagccatacagcaggcaaagctcgatgaattagcgcagcaattagcc
caagtgcgtgacagtttaagccaaggcactaaacgcttacaccagttgcagctcgataag
gccaccaaatcaacccagcttaataacgcagaagctcaggccaagcagcgcgaagcgaaa
cgcgggcaactcgcagaaaccgttgcccgaacccacgccgagttagccgagcttgccgag
cagttaatattgctttcggagcaagaggatgagctggcagaggcgctagagctcagcctt
gagcagcaacagcaacaaagccaagatgcgcagggggatatggctcgccatcaagccctg
aaggctcaaattggcgatgccgagcgtcgcttaacgagcctcaatgccagtctgcaatcg
atcgctactcggatggcggttagcacagaacaaattgaattacagcgtgtacgtgtcagt
gaattagtccactcaaaggaaacactgtcagcccaacttgccaacgtcgcggcacaagag
ggcgatcagcaaacggcgcagctcagcgaacaactggcgcaattactcaatcaacagcag
agtcagcaacaggcacttaaaagcctcaggtcacaacaaagttcgctcactgaaacgcta
aacagtataggattaaagcaaaaacaagagcttggtaagcttgagggcttgactcaaagc
ctcagcacgttaaagttacgtcgtgagggattaaaagggcaggccgatagccaattagcg
gcgctgtcagagcaacaaattgtgctcgcccagattgtcgattccctgcctgcggatggg
catcccgacaagtggcagcgtgatttggatcagatccgccaaaaaattattcgcttaggg
gcgataaacctcgcggcgatcgaagaattcgaacaacaaagtgagcgaaaatcctatttg
gatcatcaagatgaagatctaaataacggtctggccaccctagaggaagccattcggaaa
atcgataaggagacccgcactcgctttaaggccacatttgatgcggtaaacgaagatctc
gggcgtttattccctaaggtattcggtggcggacgcgcgtatttagcgctgacggaagac
gatttattagaaacgggcgtgaccatcatggcccagccgccaggtaagaagaacagtaca
atccatcttctttccggtggtgaaaaagccctaacggctttatcattggtattcgcgatt
ttcaggttgaatccagctcccttctgtatgttagacgaagtggatgcgcccttagacgat
gccaacgtagaacgattctgccgattattgaaggaaatgtcgcagagcgtacagtttatc
tatatcagccataacaaaattacgatggagatggctgatcaacttatcggtgtgactatg
catgagccgggtgtatcccgtatagtcgcagtagatttagagcaagcggtggcaatggcc
gacgcttga
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