KEGG   Shewanella decolorationis: D0436_09665
Entry
D0436_09665       CDS       T09167                                 
Symbol
cas3f
Name
(GenBank) type I-F CRISPR-associated helicase Cas3f
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
sdeo  Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:sdeo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sdeo02048]
    D0436_09665 (cas3f)
Enzymes [BR:sdeo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     D0436_09665 (cas3f)
Prokaryotic defense system [BR:sdeo02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    D0436_09665 (cas3f)
SSDB
Motif
Pfam: Cas3_I-F_Cas2 Cas3-like_C_2 DEAD Cas3_HD ResIII PAS_11
Other DBs
NCBI-ProteinID: QDZ90711
UniProt: A0A5B8QXP3
LinkDB
Position
1562581..1565967
AA seq 1128 aa
MMVTFVSQCEKNALQKTRRVLDAFANRIGDNTWQTLITEDGLLTVKKMLRQTASRSTAVS
CHWIRSRSRSQFLWVVGNKKKFNLEGVVPVNTTALNLEHKEWEQGWQLNEVILLAASIAG
LFHDFGKANNLFQAKLAGKTKQKGEPYRHEWVSLRLFEALVKGKADEAWLTELATLSATK
AAELEQSMLRNLCKDYQKQQRVFEHLSPLAKLVAWLVVSHHRLPLDHRCESRIEQMDQWL
NTCASSHWNSANALDLNVYSAEAVTQNWLFKFGTPLLSRTWQNKAQKLAIRALKNPIFSA
KNSDWLGQSFVAHIARMSLMLADHYYSSLPIEKCKTAWRDINYQPIANTDKTASSGKSSA
KQQLDEHNIGVASNAQRFIQNLPALKMTLPAITQHRLFTKSADQAKYRWQDKAFGEIKTV
AKESEKRGFFGVNMASTGCGKTIANARIMYALADEREGCRFSVALGLRTLTLQTGDAYRD
LLKLGDDELAVLVGSQAVKTLHQLSKEQEIVGSGSESADDLFADLYVSYQGQIYDGRLKH
WLSSSSKLEQLVSAPVVVSTIDHLMPATESKRGGKQIAPMLRLLTSDLVLDEPDDFGLED
LPALCRLVNWAGMLGSRVLLSSATLPPALIKNLFDAYQSGRQQFNQAQFGGNQNGSVVCA
WIDEFSSTTKEISDKDSYLEQHKIYVDKRIVKLQQQQKVLRKGQIVKLEPAKASSVYQQV
AQTIYTNMHQLHAAHHIQSPCGKKVSLGVVRLANINPMVATAKALLAMPAMPDHEIYYCV
YHSQYPLALRSYKETRLDNILSRHNESDLWQQPEINKALKASKASNLIFVVIGTSVVEVG
RDHDYDWAIAEPSSMRSLIQLAGRIQRHRQQVPSDNNLYVLNQNIRALNGESIAYCDPGF
ESKALPLGEHDLNHLDTELENISAISRITEPNFKREDFMFDAHSTDKQANKVTNFLVQEH
RALRFTLEKIGGDNYQKQFYRNDKEANLWWRSTHPHDAHWNAEFIRQTEFRQSQPQEAFV
LRVEDEALCWSQLDTSKKPYCYVSKETRFTQDNPPLAQGCHWWFSHNVLDTYQHYANALN
STLQRASEQLGEVSLRAEQNEQSITWSWHPQLGIYQDITTKEDKWTTP
NT seq 3387 nt   +upstreamnt  +downstreamnt
atgatggtcacctttgtcagtcaatgcgagaaaaacgctctccagaaaacccgccgtgta
ctggatgctttcgccaaccggattggcgataacacctggcaaaccctcatcaccgaagat
ggtttgttgaccgtgaaaaaaatgctgcgtcaaaccgccagccgcagtaccgcagtcagt
tgccactggatccgctcccgttcgcgcagccagtttttatgggtggtggggaataaaaaa
aaatttaatttggaaggtgtggtgccagtcaatacaactgcgctaaatcttgaacacaaa
gaatgggaacaagggtggcagttgaatgaagtgatattgctggcagcaagcatagcgggt
ttgtttcatgacttcggtaaagccaacaacttatttcaagctaaactagctggaaaaacc
aagcaaaaaggtgaaccttatcgccatgaatgggtatcactgaggttatttgaagccctt
gtcaaaggtaaagctgatgaagcttggctcacagaattggcaacactttctgctacaaaa
gcggcagagttagagcaatctatgctcagaaacctgtgcaaggattaccaaaagcaacaa
cgtgtgtttgagcatttatcgcctttggcaaagcttgtcgcttggttagtggtgtcacac
cacagactgcccttagatcaccgttgcgaatcacgaatagaacaaatggatcaatggtta
aacacatgcgcttccagccattggaattcagccaatgctcttgatttaaatgtttatagt
gcagaagcggttacgcaaaactggctgtttaaatttggcacacctttattaagccgcact
tggcaaaataaggcacaaaaactggcgataagagcactaaaaaatccgatttttagcgct
aagaactcagattggttaggccaaagctttgttgcccatattgcgcgaatgagtttgatg
ctggcagaccactattattcatcattgcctattgaaaaatgtaaaacggcatggcgtgac
ataaattaccaacctattgcaaacacagataaaacagcaagctcgggaaaaagttcggcg
aagcaacagcttgatgaacacaacattggcgtagcgtctaatgcgcagcgttttattcaa
aatttaccagcgcttaaaatgactttgcccgctattacgcaacacaggttgtttactaaa
agtgccgatcaagcaaagtatcgttggcaagataaagcgtttggcgaaattaaaacggtt
gcaaaagaatccgaaaaaagaggtttttttggagtcaatatggcgtcaactggctgcggt
aaaaccattgcaaatgctcgtatcatgtacgctttggctgacgaaagggagggctgccga
ttttcagtagcattaggattgagaacgctcactttacaaacgggagatgcctacagagat
cttttaaaattaggcgatgatgagttggcggtacttgttggctctcaagcggtaaaaact
cttcatcagttaagcaaagaacaagaaatcgttgggtctgggagtgaatcggcggatgac
ttattcgctgacctttatgttagctaccaaggtcaaatttacgatggtcggctcaagcat
tggctaagtagtagctccaagctagagcagctagttagtgctcctgttgttgtcagcacg
atagatcatttaatgccagcgactgaaagtaagcgtggcggtaagcagatcgcacctatg
ctacgtttgttgacctccgatttagtgctcgacgagccagatgactttggtttagaagat
ttaccagcactgtgccgtttggttaactgggcggggatgcttggttctcgagtgctattg
tcatcggctaccttgccacctgcactgattaaaaatctatttgatgcctaccaaagtgga
agacaacagtttaatcaagcccagtttggcggtaatcaaaatggctctgtagtgtgcgca
tggattgacgaattttcgagcacaaccaaagaaatcagtgacaaagacagttaccttgag
caacacaaaatctatgtagataagcgcattgtaaaactgcaacaacagcagaaagtgttg
aggaaaggccagattgttaaactagagcctgcgaaagcgagttccgtgtatcaacaagtc
gctcagacgatttacacaaacatgcatcaactacacgctgcgcaccatatacaaagccca
tgcggtaaaaaggtgtcgctaggggtagtgcgactggcaaacattaatccaatggtcgcc
acggccaaagccctgcttgcgatgccagccatgccagatcatgaaatatattattgtgtg
taccattctcaatatcctttggcacttcgctcttataaagaaacacgcctcgataatata
ttgtcacgacataatgagagtgatctttggcagcagccagaaattaacaaggcattaaaa
gccagcaaagcaagtaacttaatttttgtggtcattggtacgtcggtagtagaagttgga
cgtgaccacgattatgactgggcgatagctgagccaagctcaatgcgatcattgatccaa
ctggcaggccgtattcaacgccaccgccagcaagtgccaagcgataataatttgtatgtg
ctaaatcagaatattcgtgctctaaatggtgaatcaatcgcttattgtgatcccggcttt
gaaagtaaagccttgccccttggtgagcacgatctcaatcatttggatacggagcttgaa
aatatatcggcgatatcgcgaatcactgagccaaatttcaagagggaagattttatgttt
gacgcccacagcactgataaacaagccaataaagtgacgaactttttggtacaagagcat
agagcgctgagatttacgttagaaaagataggcggagataattaccaaaagcagttttac
cgcaacgacaaagaagccaacctttggtggcgctcaactcacccacatgatgctcactgg
aatgccgaatttattcgccaaacggaatttagacaatcgcagccacaagaagcgtttgtt
ttgcgcgtcgaagatgaggcgctatgttggagccaactcgataccagcaaaaaaccgtat
tgttacgtcagcaaagaaacgcgttttacacaagataacccccctttagctcaagggtgt
cattggtggttttcacacaatgtgctcgatacttaccagcattacgctaatgcacttaat
tcaaccttacaacgggccagtgaacaactcggcgaagtgagtttgcgggcagaacaaaat
gaacaatctattacttggagttggcacccacaactgggtatttatcaggatataacaacg
aaggaagacaaatggacaacaccttga

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